KEGG   Paenibacillus sp. FSL R7-0273: R70723_15960
Entry
R70723_15960      CDS       T03356                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
paea  Paenibacillus sp. FSL R7-0273
Pathway
paea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R70723_15960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paea03019]
    R70723_15960
Messenger RNA biogenesis [BR:paea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     R70723_15960
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2
Other DBs
NCBI-ProteinID: AIQ47212
UniProt: A0A089KFL6
Position
complement(3562656..3564317)
AA seq 553 aa
MPENRLWIGALGGVTEIGKNMYFLQYGEDIVVIDCGSKFPDESLLGIDLIIPDISYLLAN
ADKVKALVVTHGHEDHIGGIPYLLKQLNLPLYATSLTLGLIESKLKEHGLLRQADLHRID
SESVITFGSIVTSFFKTNHSIPDCLGVVFDTPEGTVVHTGDFKFDMTPVNRQYPDIHRMA
DIGKKGVRFLLSESTNAERPGFTPSERLVGKHLEEAFQKADRRIFISTFASNVHRLQQIV
DAADLTGRKLALLGRSMVNVVAVSQELGYLNIPEGMLVETAEAAKLPPHEVAVLCTGSQG
EPMAALSRLANSSNRQMEISAGDTVLLAANPIPGNERNVSRIIDNLYILGAKVIYGSRSE
LHVSGHGSQEELKLMLTLMKPEYFIPIHGEYRMLHHHRLLAEAVGVDGDKIFLLKNGELV
ESKNGTVRQAGRVPAGQIYVDGLGIGDIGNVVLRDRRQLSADGILITVITISQSEGRLLN
EPDTISRGFIYVRNSEKLMEEINQLVTATLDKLNLADLGQWSIIKQTLKEALGKFLYEKT
KRRPMILPIIIEV
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgccagaaaaccggctatggataggcgcattgggcggtgtaacggagatcggcaagaat
atgtattttctgcaatacggtgaggatatcgttgtaattgactgtggctccaaatttccg
gacgagagcctgcttggcatagacctgatcattccggacatctcttacctgctggccaat
gctgacaaggtaaaagcactggtcgttacccacggtcacgaggatcatatcggcggcatt
ccttacctgctaaagcagctgaatctaccgctctatgccaccagcctcacgctggggctg
attgaaagtaagcttaaggagcacggcttgcttcgccaggcggacttacaccggattgac
tcggaatccgtcatcaccttcggttctatcgtaaccagctttttcaagaccaatcacagc
attcctgactgcctcggtgtcgtatttgatacccctgagggtacggtcgtgcataccggt
gacttcaaatttgatatgaccccggttaaccgccaatatccggacatacatagaatggct
gatatcggcaaaaaaggtgtccggtttctgctgtccgagagcaccaatgctgaacggccc
gggttcactccgtctgagaggctggtcgggaagcaccttgaagaggcctttcaaaaagcg
gaccgaagaatcttcatctcaacctttgcctctaatgtccaccgcctgcagcagatcgtg
gatgccgctgatctgaccgggcgcaagcttgcgctgctgggccgcagtatggttaacgta
gtagctgtgtcacaggagctgggctatttgaatattccggagggaatgctggttgaaaca
gccgaagcagccaagctgccgccacacgaggttgctgttctgtgcacaggcagccagggc
gagccgatggcggcattatcccggctggccaattccagtaaccggcagatggagatcagc
gccggagacaccgtcctgctcgctgccaatcctatccccggcaatgaacgtaatgtatcc
agaatcattgataacctgtacattctgggtgccaaagtcatctacggatcacgcagtgag
cttcatgtatccgggcacggcagccaggaggagctgaagctcatgctgaccctgatgaag
cccgagtacttcatcccgattcacggggaataccggatgctgcaccatcaccggctgctg
gctgaggctgtaggcgtagacggggacaaaatcttcctgttgaaaaacggggagctggtc
gaatccaaaaacggcaccgtcagacaagccggaagggttcctgccggacagatttatgtg
gacgggctcggtatcggcgatatcggtaatgtggtgctgcgggaccgccgtcagctgtcc
gcggatgggatactgattacagtcattacgattagccaatcagagggtcggctgctgaat
gagccggatacgatttcccgcgggttcatttatgtccgcaattcagaaaagcttatggag
gagatcaatcagcttgtcacagcaactcttgataaattgaacctggccgaccttggccag
tggagcatcatcaaacaaaccctaaaagaggcgctgggcaaattcctgtatgagaaaacc
aaacgccgcccgatgattctgccgattattattgaagtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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