KEGG T03035: AI22

Pseudomonas aeruginosa YL84: AI22_09200

Entry

AI22_09200        CDS       T03035

Name

(GenBank) RTCB protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

paeg Pseudomonas aeruginosa YL84

Brite

KEGG Orthology (KO) [BR:paeg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paeg03016]
    AI22_09200
Enzymes [BR:paeg01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     AI22_09200
Transfer RNA biogenesis [BR:paeg03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    AI22_09200
Prokaryotic type
   tRNA splicing ligases
    AI22_09200

SSDB

Motif

Pfam:

RtcB DUF4514

Other DBs

NCBI-ProteinID:

AHH49046

Position

complement(2001633..2002838)

AA seq 401 aa
MNILEVAGGKPIKLWTQGVPVEEEARQQLLNTAKMPFIFKHLAVMPDVHLGKGSTIGSVI
PTLGAIIPAAVGVDIGCGMIAARTSLVAADLPDNLHGLRSAIEQAVPHGKTFGRRDRGAW
HEVPEAADQAWKALAGRFKAITDKHPRLEKTNNRQHLGTLGTGNHFIEVCLDEVDRVWFM
LHSGSRGVGNAIGNLFIELAKADMRQHIANLPDKDLAYFEEGSRHFDDYVEAVGWAQDFA
RQNRALMMYAVIEAARQVIRKPFEANLEAVDCHHNYVQKERHFGQEVLVTRKGAVSAQKG
QLGIIPGSMGAKSFIVRGLGNQEAFCSCSHGAGRTMSRTKAKKVFSVADQARATAHVECR
KDADVIDEIPMAYKDIDRVMEAQRELVEVLHTLRQVVCVKG

NT seq 1206 nt +upstreamnt +downstreamnt
atgaatatcctcgaagtggccggcggcaagccgatcaagctctggacccagggcgtcccg
gtggaggaggaagcgcgccagcagttgctgaacacggcgaagatgcccttcatcttcaag
cacctggcggtgatgcctgacgtacacctgggcaagggctcgaccatcggtagcgtgatc
cctaccctcggcgcgatcatcccggccgcggtgggcgtggatatcggctgcggaatgatc
gccgcgcgcacctcgctggtcgccgccgacctgccggacaacctgcacggcctgcgcagc
gccatcgagcaggcggtaccccacggcaagaccttcggccgccgcgaccgcggcgcctgg
cacgaggtaccggaggccgccgaccaggcctggaaggcgctcgccggtcgcttcaaggcg
atcaccgacaagcacccgaggctggagaagaccaacaaccgccagcacctgggaaccctc
ggcaccggcaaccacttcatcgaggtctgcctggacgaggtcgaccgcgtctggttcatg
ctgcacagcggttcgcgcggggtcggcaacgccatcggcaacctgttcatcgaactggcc
aaggcggacatgcgccagcacatcgccaacctgccggacaaggacctagcctacttcgag
gaaggcagccggcacttcgacgactacgtggaagcggtgggctgggcccaggatttcgcc
cggcagaaccgcgcgctgatgatgtacgcggtgatcgaggcggcgcgccaggtgatccgc
aagccgttcgaagccaacctggaggcggtcgattgccaccacaactacgtgcagaaggag
cgccacttcggccaggaggtactggtcacccgcaaaggcgcggtgtccgcgcagaagggc
cagctcggcatcattcccggctcgatgggggcgaagagcttcatcgtccgcggcctcggc
aaccaggaagcgttctgctcgtgcagccacggcgccgggcggaccatgagccggaccaag
gcgaagaaggtcttcagcgtcgccgaccaggcgcgcgccaccgcccacgtcgaatgccgc
aaggacgccgacgtgatcgacgagatcccgatggcctacaaggacatcgaccgggtcatg
gaagcccagcgcgagctggtggaagtgctgcacaccctgcgtcaggtggtgtgcgtgaaa
ggatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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