KEGG   Pseudomonas aeruginosa YL84: AI22_27420
Entry
AI22_27420        CDS       T03035                                 
Name
(GenBank) exodeoxyribonuclease
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
paeg  Pseudomonas aeruginosa YL84
Pathway
paeg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:paeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AI22_27420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paeg03400]
    AI22_27420
Enzymes [BR:paeg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     AI22_27420
DNA repair and recombination proteins [BR:paeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AI22_27420
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AHH52569
Position
5937175..5938554
AA seq 459 aa
MRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNLARPASGHVYFTLKDS
NAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAF
EALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPT
AVQGREAVAQIVRALQLADRQGFDALILARGGGSLEDLWCFNEEAVARAVAACATPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQLLRERLR
LEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQHPGRTL
ALLRQKLDSLAARLPRAAREVLKDRRQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAI
RDAGQTQPGQRLKARLAEGELEVRVEDNHRTPVTLSLLD
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgtaacgatcccttccaacggctcggcctcgatcgcgaggtgctgaccgtcagccaa
ctgaaccagcgcgcccgcctgctgctggaagacgtgttcccgcaggtctgggtcgagggc
gagctgtccaacctcgcccggccggcctccggccatgtctacttcaccctcaaggacagc
aacgcgcagatccgctgcgcgctgttccggcagaacgccctgcgcgtacgccaggccttg
cgcgacgggctggcggtaaaggtgcgcgggaagatctcgctgttcgagggacgcggcgac
taccagttgatcgccgataccgtcgagccggccggcgacggcgccctgcgcctggccttc
gaggcattgaaggaaaaactcgccggcgaaggcctgttcgccagcgaacgcaagcgtccg
ctgcccgcccatccgcgccgcatcggtatcgtcagttcgcccagcggggcggtgatccgc
gacatcatcagcgtgtttcgccgccgcgcaccgcaggtcgagctgaccctggtgcccacc
gcagtgcagggccgcgaggccgtcgcacagatcgtccgcgcgctgcaactggccgaccgg
cagggcttcgacgcgctgatcctggcccgtggcggcggttccctggaagacctctggtgc
ttcaacgaagaagcggtggcgcgcgccgtggcggcctgcgccacgccgatcgtcagcgcg
gtcggccacgagaccgacgtatcgatcagcgacttcgtcgccgacgtgcgcgcgccgacg
ccttcggccgccgccgaactgctggcgcccaacgccggcgacctgcagcagcgtctcgac
ggcctgcgccggcgcctggtgctgcgcatgcgcgaccagttgctgcgcgaacgcctgcgc
ctggaaggcgtcgcccgccgcctgcgccatcccggcgaacgcctgcgccagcaggcacag
cgcctggacgacctggacatgcgcctgcgccgtgccttcgagcgccagctggcggtccgc
cacgaacgcctggtccgcctggagacgcgtctcgccgcacagcatccgggccgcaccctg
gcgctgctccggcagaagctcgacagcctcgccgcgcgcctgccgcgcgccgcccgcgag
gtactgaaggatcgtcgtcagcgcctcgaaggactggcgcagacgctcaacgtggtcagc
ccgctggcgaccctgggccgcggctacagcatcctcctcgacgagcgtggccgggcgatc
cgcgatgccggccagacccagccgggacagcgcctgaaggcgcgcctcgcggaaggcgaa
ctggaggtgcgggtcgaggacaaccaccggacgccggtgaccctgtcgctgctggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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