KEGG   Pseudomonas aeruginosa PA38182: BN889_05483
Entry
BN889_05483       CDS       T03031                                 
Name
(GenBank) protein hfq
  KO
K03666  host factor-I protein
Organism
paeu  Pseudomonas aeruginosa PA38182
Pathway
paeu02024  Quorum sensing
paeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN889_05483
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BN889_05483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paeu03019]
    BN889_05483
   03036 Chromosome and associated proteins [BR:paeu03036]
    BN889_05483
Messenger RNA biogenesis [BR:paeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BN889_05483
Chromosome and associated proteins [BR:paeu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BN889_05483
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: CDI93500
Position
complement(5735193..5735441)
AA seq 82 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSGDQPAEPGNA
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctcaataccctgcggaaagaacgcgtc
ccggtttccatctatctggtcaacggcatcaagctgcaaggccagatcgagtccttcgac
cagtttgtcatcctgctgaagaacaccgtcagccagatggtttacaagcacgcgatctcc
accgtggtaccgagccgtccggtgcgtctgccgagcggtgaccagccggccgagccgggc
aacgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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