KEGG   Pseudomonas aeruginosa M18: PAM18_3033
Entry
PAM18_3033        CDS       T01973                                 
Symbol
liuD
Name
(GenBank) methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)
  KO
K01968  3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Organism
paf  Pseudomonas aeruginosa M18
Pathway
paf00280  Valine, leucine and isoleucine degradation
paf01100  Metabolic pathways
Module
paf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:paf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    PAM18_3033 (liuD)
Enzymes [BR:paf01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.4  methylcrotonoyl-CoA carboxylase
     PAM18_3033 (liuD)
SSDB
Motif
Pfam: CPSase_L_D2 MCC_alpha_BT Biotin_carb_N Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C Biotin_lipoyl_2 ATP-grasp HlyD_3 HlyD_D23 GARS_A ATP-grasp_3 ATPgrasp_ST LAL_C2 ATP-grasp_4
Other DBs
NCBI-ProteinID: AEO75516
Position
3383001..3384968
AA seq 655 aa
MNPDYRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGA
KPVDSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMG
SKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLKAAAGGGGKGMKVVERE
AELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRR
HQKVVEEAPAPGLGVELRRAMGEAAVRAAQAIGYLGAGTVEFLLDERGQFFFMEMNTRLQ
VEHPVTEAITGLDLVAWQIRVARGEALPLTQEQVPLNGHAIEVRLYAEDPEGGFLPASGR
LALYREAPAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREEARQRLLAMLAETSVG
GLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPAPQALPEHFWQAAAEAWLQSEPG
HRRDDDPHSPWSRNDGWRSALAREADLMLRCRDERRCVRLRHASPSQYRLDGDDLVSRVD
GVTRRSAALRRGRQLFLEWEGELLAIEAVDPIAEAEAAHAHQGGLSAPMNGSIVRVLVEP
GQTVEAGTALVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDENQA
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgaacccggactaccgcagcatccagcgcctcctggtcgccaaccgcggcgagatcgcc
tgccgggtgatgcgcagcgcgcgcgccctcggcatcggcagcgtcgccgtgcacagcgac
atcgaccgccacgcccgccacgtcgccgaagccgacatcgccgtcgacctgggcggcgcc
aagcccgtcgacagctacctgcgcggcgacaggatcatcgccgccgccctcgccagcggc
gcccaggcgatccaccccggctacggcttcctctcggagaacgccgacttcgcccgcgcc
tgcgaggaagccggcctgctcttcctcggaccgccggcggcggccatcgacgccatgggc
agcaagtcggccgccaaggcgctgatggaagaagccggcgtgccgctggtgcccggctat
cacggcgaagcccaggacctcgagactttccgccgggaagccgggcgcatcggctacccg
gtgctgctcaaggccgccgctggcggcggcggcaagggcatgaaggtggtggagcgcgag
gccgagctggccgaggccctttcctccgcccagcgcgaggccaaggccgccttcggcgac
gcgcggatgctggtggagaaatacctgctgaagccgcgccacgtggagatccaggtattc
gccgaccgccatggccactgcctgtacctcaacgaacgcgactgttcgatccagcgccgc
caccagaaggtcgtcgaggaagcccccgcccccggtctcggtgtggaactgcgccgggcc
atgggcgaggccgcggtacgcgcggcgcaggcgatcggctacctcggcgccggtaccgtc
gaattcctcctcgacgaacgcggccagttcttcttcatggaaatgaacacccgcctgcag
gtggaacacccggtcaccgaggccatcaccggcctcgacctggtcgcctggcagatccgc
gtcgctcgcggcgaggcgctgccgctgacacaggaacaggtgccgctgaacggccacgcc
atcgaagtgcggctctacgcggaagaccccgagggcggcttcctccccgccagcggccgc
ctggcgctgtaccgcgaagcgcccgccggccccggccggcgggtcgacagcggggtacgc
gaaggcgacgaggtctcgccgttctacgacccgatgctggccaagctgatcgcctggggc
gaaacccgcgaggaagcccgccagcgcctgctggcgatgctggcggaaacctcggtcggc
ggcctgcgcaccaacctggcgttcctccgccgcatcctcggccatccggcgttcgccgcc
gccgaactggacaccgggttcatcgcgcgccaccaagacgacctgctgccggcgccgcaa
gcgctgccggagcatttctggcaagccgccgccgaagcctggctgcagagcgaaccgggc
caccgtcgcgacgacgacccgcattcgccgtggagccgcaacgacggctggcgcagcgcc
ctggcgcgggaggccgacctgatgctgcgctgccgcgacgaacgccgctgcgtccgcctg
cgccacgccagccccagccagtatcgcctggacggcgacgacctggtcagccgggtggac
ggtgtcacccgtcgctcggcggcgttgcgccgcggacgccagttgttcctcgaatgggag
ggcgaactgctggccatcgaagccgtcgacccgatcgccgaagccgaggccgcccatgcc
caccagggtggtttgagcgcgccgatgaacggcagtatcgtgcgggtcctggtcgagccc
ggccagacggtcgaagccggcaccgccctggtggtgctggaggcgatgaagatggaacac
agcatccgcgcgccccacgccggggtagtgaaggcgctgtattgcagcgagggcgaactg
gtagaggaaggcacgccgctggtggagctggacgagaaccaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (32)   

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