KEGG   Pantoea vagans FDAARGOS_160: AL522_09145
Entry
AL522_09145       CDS       T04302                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
pagg  Pantoea vagans FDAARGOS_160
Pathway
pagg00730  Thiamine metabolism
pagg01100  Metabolic pathways
pagg01240  Biosynthesis of cofactors
pagg04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:pagg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AL522_09145
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    AL522_09145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pagg03016]
    AL522_09145
Enzymes [BR:pagg01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     AL522_09145
Transfer RNA biogenesis [BR:pagg03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AL522_09145
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC Diphthami_syn_2 tRNA_Me_trans Glyco_hydro_42
Other DBs
NCBI-ProteinID: AMG57791
Position
1218232..1219680
AA seq 482 aa
MKFIIKLFPEITIKSPSVRLRFIKILASNIRNVLKTVSDDMAVVRYWDHIEVRSKNPALA
DIIPDELSRIPGIHHVLAVEYREYTDIHHIFEQTLAQYRDSLEGKSFCVRVKRRGKHSFS
SQDVERYVGGGLNQHIESARVQLKNPDVTVNLEVEENRLTLVTARYEGLGGFPIGTQEDV
LSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGRSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASTIAERYGVQALVTGEAVGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIISVAREIGTEDFASTMPEYCGVISKSPTVKAVKAKI
EAEEQNFDFSILDRVIEEATNVDIRTIAEQTEEEVVEVETVALLSDNDVVLDIRSIDEQE
EKPLTLNATEVKSLPFYKLSTQFGDLDQNRTWLLYCDRGVMSRLQALYLHEQGFKNVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcatcaagttatttccagaaatcaccattaagagtccgtcggtgcgcttg
cgctttatcaagattcttgccagcaatattcgtaacgtcctgaaaaccgtcagcgacgac
atggccgttgtgcgctactgggatcacattgaagtgcggtcaaaaaatccggcactggcg
gacattattcccgatgagctttcccgcattcccggtatccatcacgttttagcggttgaa
tatcgcgagtacaccgatattcatcacatctttgaacagacgttagcgcagtatcgcgac
agtcttgaaggcaagagcttctgcgtacgtgtgaaacgtcgcggtaagcatagcttcagt
tcgcaggatgtagaacgctatgtgggtggtggtctgaatcagcatattgaaagcgcccgc
gtgcagcttaaaaaccctgacgtgacggtgaaccttgaagttgaagagaatcgcctgacg
ctggtgacggcgcgctacgaaggtctgggcggtttcccgatcggcacgcaggaagatgtg
ctgtcgctgatttccggcggtttcgactccggtgtctccagctatatgctgctgcgccgc
ggcagccgcgtgcattactgcttctttaaccttggcggtgccgctcatgagattggcgtg
cgtcaggttgcacattatctgtggaatcgttttggtcgttcacaccgcgtgcgcttcgtg
gcgatcaattttgagccggtcgtcggtgaaatcctcgaaaaagtggatgacggccagatg
ggcgtggtgctgaagcgcatgatggtgcgtgccgcctcgacaattgctgagcgctacggc
gtgcaggcgctggtcacgggtgaagcggtagggcaggtgtcgagccagacgctgaccaac
ctgcgcctgattgataacgcgtcggatacgttgatcctgcgtccgctgatctctcatgac
aaagagcacatcatcagcgttgcccgggagatcggcactgaagatttcgccagcaccatg
ccggaatattgtggtgtgatctcaaaaagcccgacggtgaaggcggtgaaggcgaagatc
gaagcggaagagcagaatttcgacttctcgattctggatcgggtcatcgaagaagcgacc
aacgtcgatatccgtactattgctgagcagacagaagaggaggtggtggaagttgagacc
gtcgcgcttctgagtgacaacgatgtggtgctggatatccgctctattgatgagcaggaa
gagaagccactgacgctgaacgccacggaagtgaagtcgctgccgttctacaaactcagt
acgcagtttggcgacctcgaccagaaccgcacctggttgctctactgcgatcgtggtgtg
atgagccgtctacaggcgctctatctgcatgagcagggctttaagaacgtaaaagtctac
cgcccgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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