KEGG   Pyrobaculum aerophilum: PAE0781
Entry
PAE0781           CDS       T00073                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
pai  Pyrobaculum aerophilum
Pathway
pai03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PAE0781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pai03021]
    PAE0781
Transcription machinery [BR:pai03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     PAE0781
 Prokaryotic type
  Archaeal type
    TFE
     PAE0781
SSDB
Motif
Pfam: TFIIE_alpha LysW-like_globular TF_Zn_Ribbon RUBY_RBDX HMBD Rad50_zn_hook ADK_lid zinc_ribbon_4 HTH_9 zinc-ribbons_6 Aida_N DZR_2 HypA DNA_ligase_ZBD zf-C2H2_3 zf-RRN7 zf-HIT
Other DBs
NCBI-ProteinID: AAL63023
UniProt: Q8ZYH0
Position
complement(436074..436586)
AA seq 170 aa
MKDVYLYIVEKSVAWEFDSPEYGRLARKVAEMLYERKEDLTDDRIAILLNISTAETRRIL
QYLMRLNLVGVKKRTTEDYRIEYTWYVDDEIIKQAIGGRARTAREKISMLIRALTEGSYY
ICPNCHMRYSLDEAVNKGGVCPVCGAELEYVESLEEINKLTKVLQKLEKL
NT seq 513 nt   +upstreamnt  +downstreamnt
gtgaaggacgtgtatctgtatattgttgagaaaagcgttgcctgggaatttgacagccct
gagtatgggcggctggcgcggaaagtagctgagatgttatatgagcgaaaggaggatctc
acagacgacagaattgcgattctactaaatatatccacggctgagacgcgtaggatttta
caatacctcatgaggcttaatttagtaggcgtaaagaagaggacgacagaggattaccgc
atagagtatacgtggtatgttgacgacgaaattataaaacaggcgataggcggcagggct
agaactgctagggagaaaatatctatgcttataagggcgcttacagagggatcttactac
atatgtccaaactgtcatatgcggtactcccttgacgaggctgtgaacaaaggcggcgtg
tgtcctgtatgtggcgctgagttggaatacgtagagagtttggaggaaattaataaactt
acaaaagtattgcaaaaacttgaaaagctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (17)   
   Pfam (17)   
All databases (36)   

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