KEGG   Pteropus alecto (black flying fox): 102885197
Entry
102885197         CDS       T02993                                 
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X2
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale04820  Cytoskeleton in muscle cells
pale04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:pale00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102885197 (COL11A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102885197 (COL11A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pale00536]
    102885197 (COL11A1)
Glycosaminoglycan binding proteins [BR:pale00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102885197 (COL11A1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 102885197
NCBI-ProteinID: XP_006919634
Position
Unknown
AA seq 1806 aa
MERWSSRWKTKRWLWDLTVTTLALTSLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQVGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQVDEYAPEDIMEYDYEYGEAEYKEAESVTERPTVAEETIAQTEA
NIVDDFQEYNYGTVESYQTEAPRRVSGTNEPNPVEEVFTEEYLTGEDYDSQRKNSEDTLY
ENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKQTSPTNEEFGPGVPAETDITETSINGHG
AYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPSGPPGDPGERGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTVSAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR
GFDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GPIGQPGIAGIDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQLGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKD
GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGIQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEA
GNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEAGPSGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLP
GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGTPGAKGDGGIPGPAGPIGPP
GPPGLPGPQGPKGTKGSAGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTES
MQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG
EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDMSSGSYDKALRFLGSNDE
EMSYDNNPYIKALYDGCESRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG
PVCFLG
NT seq 5421 nt   +upstreamnt  +downstreamnt
atggagcggtggtcctctaggtggaaaacgaaacggtggctctgggacctcaccgtaaca
accctcgcactgacgtccctcttccaggctagagaggtcagaggagctgctccagttgat
gttctaaaagctctagattttcacaattctccagagggaatatcaaaaacaacaggcttt
tgcacaaacagaaagaattcaaaaggttcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagctattttcaggaggaacttttccagaagatttttca
atattatttacagtaaaacccaaaaaagggattcagtctttccttttatctatatacaat
gagcatggtattcagcaagtcggtgttgaggttggtaggtcaccggttttcctatttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gatggaaagtggcatcgagtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacaaaaccacttgacagaagtgagagagcaattgttgacacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatc
cagcagttgttgatcacaggtgaccccaaagccgcttatgactactgtgagcattacagt
ccagactgtgattcttcggcgcccaaggccgcgcaggcgcaggagccccaggtcgatgag
tatgcacctgaggatataatggaatatgactatgagtatggggaagcagaatataaagag
gctgaaagtgtaacagagagacctactgtagctgaggagaccatagcacaaacggaggca
aatattgttgatgattttcaagaatacaactacggaacagtggaaagttaccagacagaa
gctcccaggcgtgtatctggaacgaatgagccaaatccagttgaagaagtatttactgaa
gaatatctaactggagaggattatgattcccagaggaaaaattccgaggatacactatat
gaaaacaaagaaatagacggcagggactctgatcttctggtagatggagatttaggagaa
tatgatttttatgaatataaagaatatgaagataaacaaacaagccccactaatgaagaa
tttggtccaggtgttccagcagaaacagatatcacagaaacaagcataaatggccatggt
gcatatggagaaaaaggacaaaaaggagaaccagcagtagttgaacctggtatgcttatt
gaaggaccaccagggccggcaggacctgcgggtcttatgggtcctccaggtctacaaggc
ccctccggaccccctggtgaccctggagagaggggtcccccaggacgtcctggcttacca
ggggctgatggtctacccggtcctcctggtaccatgctaatgttaccatttcgttatggt
ggtgatggttccaaaggaccaaccgtctctgctcaggaagctcaggcccaagcgattctc
cagcaggctcggattgctttgagaggtccacctggcccaatgggtctaacaggaagacca
ggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatcctggtcct
cagggccctcgcggtgttcaaggcccacctggtccaacgggaaaacctggaaaaaggggc
cgtccaggtgccgatggtggaagaggaatgccaggagaacctggggcaaagggggatcga
ggatttgatggacttccaggattgccaggtgataaaggtcataggggtgaaagaggtccc
caaggtcctcccggtcctcccggtgaagatggaatgaggggagaagatggagaaatagga
cccaggggtcttccaggtgaagctggtccacgaggtttgctaggaccgcggggaactcca
ggacctatagggcagcctggtattgcaggtatagatggccctccaggacccaaagggaac
atgggcccccagggggagcctggacctccaggtcagcaagggaacccaggacctcagggt
cttcctggtccacaaggtccgattggtcctcctggtgaaaaaggaccacaaggaaaacca
gggcttgctggacttcctggtgctgatgggcctcctggtcatcctggaaaagaaggccag
tctggagataagggtgctctgggtcctcctggtccacagggtcctattggctatcctggt
cccagaggagtaaagggagcagatggtgtcagaggtctcaagggttctaaaggtgaaaag
ggtgaagatggttttccaggattcaaaggtgacatgggtcttaaaggtgacaggggagaa
gttggtcagttaggtccgagaggagaagatggccccgaaggccccaaaggtcgagcaggt
ccaactggagacccgggtccttctggtcaagcaggagagaaggggaaacttggtgttcca
ggattaccaggatatccaggaagacaaggtccgaagggttccactggatttcctgggttt
cctggtgccaatggagagaaaggtgcacggggtgtagctggcaaaccaggccctcggggt
caacgtggtccaacgggtcctcgaggttctaggggtgcgagaggtcccactgggaaacct
ggtccaaagggcacttctggtggtgacggtcctcctggccctcccggtgaaagaggccct
caaggaccgcagggtccagttggattccctggaccaaaaggccctcctggaccaccaggg
aaggatggcctgcccgggcaccctgggcagcgtggggagacgggatttcaaggcaagact
gggcctcctgggccagggggtgttgttggaccacaggggcccactggcgagacaggtcca
ataggtgaacgtggacaccccggtcctcctggccctcctggtgagcaaggtctccctgga
gctgcaggaaaagaaggtgcaaagggcgacccaggtcctcaaggtgtctcagggaaagat
ggaccagcaggactccgtggtttcccaggtgaaagaggacttcctggagctcagggcgca
cctggactgaaaggaggagaaggtccccagggcccaccaggtccagttggctcaccagga
gaacgtggatctgcaggtacagctggcccaattggattgccagggcgtccaggaccccag
ggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccgcagggcccc
gctggcagagatggagtacaaggccctgtgggtctcccggggcctgctgggcccgctggc
tcccctggagaagatggagacaagggtgaaattggtgaaccaggacaaaaaggcagcaag
ggtgacaaaggagaaaatggtcctcctggtcccccaggtattcagggtccagtcggtgcc
cccggaattgctggaggtgatggcgagccaggccccagaggccagcaggggatgtttgga
caaaaaggtgatgagggtgcaagaggtttcccaggacctcctggtcccataggtcttcag
ggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgtcggtcccatgggtcca
cctggtcctccaggccctcgaggtcctcaaggtcccaatggagctgatggaccgcaagga
cccccaggatccattggttcagttggtggtgttggagaaaagggtgaacctggagaagcg
ggaaacccagggcctcctggcgaagcaggaacaggcggtcccaaaggagaaagaggagag
aaaggagaagctgggccacctggtgctgctggacctcctggtgccaagggaccaccaggt
gatgatggccctaagggcaacccgggtcctgttggttttcctggagatcctggtccccct
ggggaagctggcccttcaggtcaagacggcgttggtggtgacaagggtgaagatggagat
cctggccaaccgggtcctcctggtccatctggtgaggctggcccaccaggtcctcctgga
aaaagaggtcctcctggagctgcgggtgcagagggaagacaaggtgaaaaaggtgctaag
ggagaagcaggtgctgagggtcctcctggaaaaacgggccccgtcggccctcagggacct
gccggaaagcccggtccagaaggccttcggggcatccctggccctgtgggagaacaaggt
ctcccaggagctgcaggccaagatgggccacctggtcctctgggacctcctggattacca
ggtctcaagggtgaccccggctccaagggtgagaagggacatccaggtttaataggcctg
attggtcctccaggagaacaaggtgagaagggtgaccgaggactccctggaactcaagga
actccaggagcaaagggcgacgggggaattccaggtcctgctggtcccataggtccacct
ggccctccaggcttaccgggtcctcaaggtccaaaaggcaccaaaggctctgctggacct
gctggccagaagggtgacagtggccttccagggcctcctgggcctccgggtccacctggt
gaagtcattcagcctttaccaattttgtcacctaaaaaaacaagaagacatactgaaagt
atgcaggcagatgcaggtgataatattcttgactactcagatggaatggaggaaatattt
ggttccctcaattccctgaaacaagacatcgagcatatgaagtttccaatgggtactcag
accaacccagccagaacttgcaaagatcttcaactcagccatcctgacttcccagatggt
gaatattggattgatccaaaccaaggttgctcaggagattccttcaaagtttattgtaat
ttcacgtctggtggtgagacatgcatttatccagacaaaaaatctgagggagtaagaatt
tcatcatggccaaaagagaaaccaggaagctggtttagcgaatttaagagaggaaaactg
ctttcatatttagatgttgaaggcaattccattaatatggtgcaaatgacattcctgaaa
ctgctgactgcctctgctcggcaaaatttcacctatcactgtcatcagtcagcagcctgg
tacgatatgtcatcagggagctatgacaaagcacttcggttcctgggatcaaatgatgag
gagatgtcctatgacaacaacccttacatcaaagcactgtacgatggctgtgagtccaga
aaaggctatgaaaagactgtgattgaaatcaatacaccaaaaattgatcaagtacctatc
gttgatgtaatgattaatgactttggtgatcagaatcagaagtttggatttgaagttggt
cctgtttgttttcttggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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