KEGG   Pteropus alecto (black flying fox): 102885580
Entry
102885580         CDS       T02993                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III isoform X1
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03013  Nucleocytoplasmic transport
pale03015  mRNA surveillance pathway
pale03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102885580 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102885580 (EIF4A3)
   03015 mRNA surveillance pathway
    102885580 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pale03019]
    102885580 (EIF4A3)
   03041 Spliceosome [BR:pale03041]
    102885580 (EIF4A3)
   03009 Ribosome biogenesis [BR:pale03009]
    102885580 (EIF4A3)
   03012 Translation factors [BR:pale03012]
    102885580 (EIF4A3)
Enzymes [BR:pale01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102885580 (EIF4A3)
Messenger RNA biogenesis [BR:pale03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102885580 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     102885580 (EIF4A3)
Spliceosome [BR:pale03041]
 Complex C
  Other components
   EJC/TREX
    102885580 (EIF4A3)
Ribosome biogenesis [BR:pale03009]
 Eukaryotic type
  90S particles
   Helicases
    102885580 (EIF4A3)
Translation factors [BR:pale03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    102885580 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD
Other DBs
NCBI-GeneID: 102885580
NCBI-ProteinID: XP_006912228
UniProt: L5KL47
Position
Unknown
AA seq 411 aa
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcggccacggccacgatggcgacctctggctcggcgcggaagcgtctgctcaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacccccacgttc
gacaccatgggcctgcgggaggacctgctacgcggcatctacgcctacggatttgaaaaa
ccgtcggcaatccaacagcgagccatcaagcagataattaaagggcgagatgtcatcgca
cagtctcagtctggcacaggcaaaactgccaccttcagtatttccgtcctccagtgtttg
gatattcaggttcgtgagacccaggctttgattttggccccaacgagagagctggctgtg
cagatccagaagggcctgctcgctctgggtgactacatgaacgtccagtgtcacgcctgc
atcgggggcaccaacgtgggggaggacatcaggaagctggactatggacagcacgtggtc
gccggcacgccgggccgtgtctttgatatgattcgtcgcagaagtttaaggacacgtgct
atcaagatgctggttttggatgaggccgatgaaatgctgaataaaggtttcaaagagcag
atctacgacgtgtacaggtacctgcccccggccacgcaggtggtgctcatcagcgccacg
ctgccccacgagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcctg
gtgaaacgtgacgagctgactctagaaggcatcaagcagttttttgtggcggtggagaga
gaagagtggaaatttgacactttgtgcgacctctacgacacgctgaccatcacacaggct
gtcatcttctgcaacaccaaaaggaaggttgactggctgacagagaagatgagagaagcc
aacttcaccgtgtcgtcgatgcatggggacatgccacagaaggagcgggagtccatcatg
aaggagttccggtctggtgccagccgcgtgctcatttccaccgacgtctgggcccggggg
ctggacgtccctcaggtgtccctcatcatcaactatgacctgcccaacaacagagagctg
tacatccacaggatcggccggtcgggccggtacggccggaagggcgtggccatcaacttc
gtaaagaacgatgacatccgcatcctgcgggacatcgagcagtactactccacgcagatc
gacgagatgcccatgaacgttgccgacctgatctga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (312)   
   KEGG ORTHOLOGY (1)   
   RefGene (308)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (335)   

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