KEGG   Pseudomonas alkylphenolica: PSAKL28_48450
Entry
PSAKL28_48450     CDS       T03238                                 
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
palk  Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:palk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:palk03009]
    PSAKL28_48450
Enzymes [BR:palk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PSAKL28_48450
Ribosome biogenesis [BR:palk03009]
 Prokaryotic type
  rRNA helicases
   PSAKL28_48450
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA Methyltransf_17 CMS1 SBP_bac_3
Other DBs
NCBI-ProteinID: AIL63985
UniProt: A0A077FHD7
Position
5296992..5298392
AA seq 466 aa
MQARLVTTIATAFATLPLSAAMLANLDALGYAQMTPIQAQSLPVILKGMDLIAQAKTGSG
KTAAFGIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSL
GPQIASLEHGAHIIVGTPGRIQQHLSKGTLVLDGLNTLILDEADRMLDMGFYDAIADIIG
QTPKRRQTLLFSATYPSGIKQLASTFMRDPQTVKVETLHADSQIEQHFYEITPEQRMEAV
TKVLGHFRPQSCVAFCFTKQQCQELVEHLQAKGISAQALHGDLEQRDRDQVLTLFANRSL
SVLVATDVAARGLDIDALDMVINVELARDAEIHVHRVGRTGRAGEKGLAISLVAPAEGHR
AQAIEDIQKAALRWEQLDSLKAQNGAPLLPTMSTLCIAAGRKDKLRPGDILGALTGDAGL
PGTQVGKIAIFDFQAFVAVERAVAKQALQRLNNGKIKGRSLRVRIV
NT seq 1401 nt   +upstreamnt  +downstreamnt
ttgcaggcccgcctcgtgaccaccattgccaccgccttcgccaccttgccgctgtccgcc
gccatgctggccaacctggacgccctcggctacgcccagatgaccccgatccaggcccag
agcctgccggtaatcctcaagggcatggacctgatcgcccaggccaagaccggcagtggc
aagaccgctgcattcggcatcggcctgctcaacccgatcaacccgcgctacttcggttgc
caggccctggtcctgtgcccgacccgcgagctggctgaccaggtggccaaagagctgcgc
cgtctggcccgcgccgaagacaacatcaagatcctgaccctgtgcggcggtgtgtccctg
ggcccgcagattgcttcgctggaacacggcgcgcatatcatcgtcggcaccccgggccgc
attcagcagcacctgagcaaaggcaccctggtgctcgacggtctcaacacgctgattctc
gatgaagccgaccgtatgctcgacatgggcttctacgacgccatcgccgacatcatcgga
caaaccccgaagcgccgtcagaccctgctgttctcggcgacctatccgtcgggcatcaag
cagctggcctcgaccttcatgcgtgacccgcagaccgtcaaggtcgaaaccctgcacgcc
gacagccagatcgaacagcatttctacgaaatcactccagagcagcgcatggaggcggtc
accaaggtgctcggccacttccgcccgcaatcgtgcgtagcgttctgcttcaccaagcag
caatgccaggagctggtcgagcacctgcaggccaagggcatttccgctcaagcgctgcat
ggcgacctcgagcagcgcgaccgtgaccaggtcctgaccctgttcgccaaccgcagcctg
tcggtgctggtggcaaccgacgtcgccgcccgtggtctggacatcgatgccctggacatg
gtcatcaacgtcgaactggctcgcgatgccgagattcatgtgcaccgcgttggccgtacc
ggccgtgccggcgagaaaggtctggccatcagcctggtcgccccggccgaaggccaccgt
gcccaggccatcgaagacattcagaaagccgcgctgcgctgggaacagctggacagcctc
aaggctcagaacggcgctccgctgctaccgaccatgagtaccctgtgcattgctgccggg
cgcaaagacaaactgcgcccgggcgatatcctcggcgccttgaccggcgacgccgggttg
ccgggcacccaggtgggcaagatcgccattttcgacttccaggcctttgttgcggtggaa
cgcgcggtcgccaaacaagcgctgcagcgtctgaacaatggcaaaatcaagggccggtcg
ctacgggtgcgcatcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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