KEGG   Pseudomonas alkylphenolica: PSAKL28_51280
Entry
PSAKL28_51280     CDS       T03238                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
palk  Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:palk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palk03400]
    PSAKL28_51280
Enzymes [BR:palk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSAKL28_51280
DNA repair and recombination proteins [BR:palk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSAKL28_51280
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 DEAD DUF287
Other DBs
NCBI-ProteinID: AIL64268
UniProt: A0A077FGC9
Position
5614927..5616936
AA seq 669 aa
MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAHLIQNCGIRAQYIVAMTFTNKA
AREMKERVGTLLRKGEGRGLTVSTFHNLGLNIIRKEHQRLGYKPGFSIFDETDVKALMTD
IMQKEYSGDDGVDEIKNMIGAWKNDLILPPEALEKARNPKEQTAAIVYAHYQRTLKAFNA
VDFDDLILLPVKLFEEHADILEKWQNKVRYLLVDEYQDTNASQYLLVKMLIGTRNQFTVV
GDDDQSIYAWRGARPENLMLLKEDYPSLKVVMLEQNYRSTSRILRCANVLISNNPHAFEK
QLWSEMGHGDEIRVIRCKNEESEAERVAMEILSLHLRTDRPYSDFAILYRGNYQAKLIEL
KLQHHQVPYRLSGGNSFFGRQEVKDLMAYFRLLVNPDDDNAYLRVINVPRREIGSTTLEK
LGNYATERKISMYAASEELGLGEHLDSRFTDRLQRFKRWMDKVREQVALEDPIAALRGMV
TDIDYENWIRTNSSSDKAADFRMGNVWFLIEALKNTLEKDEDGEMTIEEAIGKLVLRDML
ERQQEEEDGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTIEEERRLAYVG
ITRARQTLAFTFAAKRKQYGEIIDCAPSRFLDELPDDDLAWEGLDDAPTEVKAARGNNAL
ADIRAMLKR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcccgactcaatccccggcaacaagaagccgtgaactacgtcggcggccctcttttg
gtgctcgccggtgccggttccggcaagaccagcgtgatcacccgcaaaatcgcgcacctg
atccagaattgcggcatccgtgcgcagtacatcgtggccatgaccttcaccaacaaggcc
gcacgggagatgaaagagcgggtcggcaccctgttgcgcaaaggcgaggggcgcggcctg
accgtgtcgacctttcacaacctgggcctgaacatcatccgcaaggaacatcagcgactg
ggctacaagccgggtttctcgatcttcgacgagaccgacgtcaaagcgctgatgaccgac
atcatgcaaaaggaatactcgggcgacgacggtgtcgacgagatcaagaacatgatcggc
gcctggaaaaacgacctgatcctgccgcccgaggccctggaaaaggcgcgcaatcccaag
gagcagaccgctgccatcgtttacgcccactaccagcgcacgctcaaggcgttcaacgcg
gtggacttcgacgacctgatcctgctgccggtgaagctgttcgaggaacacgccgacatc
ctggaaaaatggcagaacaaggtgcgctacctgctggtggacgaataccaggacaccaac
gccagccagtatttgctggtgaaaatgctgatcggcacgcgcaaccagttcaccgtggtc
ggtgacgacgaccagtcgatctacgcctggcgtggcgcgcgcccggaaaacctgatgttg
ctcaaagaggattacccgtcgctgaaggtggtgatgctcgagcagaactaccgctccacc
agccgcatcctgcgctgcgccaacgtgctgatctcgaacaacccgcatgcgttcgagaag
cagctgtggagcgagatgggccacggtgacgagatccgtgtgatccgctgcaagaacgag
gagtccgaggccgaacgggtggccatggaaatcctcagcctgcacctgcgcaccgaccgc
ccttacagcgatttcgccatcctctaccgcggcaactaccaggccaagctgatcgaactg
aagctgcagcaccatcaggtgccgtaccgtctgtccggcggcaacagcttcttcggacgc
caggaagtaaaagacctgatggcctacttccgcttgctggtgaacccggacgacgataac
gcttacctgcgggtgatcaacgtaccgcgccgggaaatcggctcgaccaccctggaaaag
ctcggcaactacgccaccgaacgcaagatctcgatgtacgccgccagcgaggagctgggc
ctgggcgagcatctggacagccgcttcaccgaccgtctgcagcgcttcaagcgctggatg
gacaaggtccgcgagcaggttgccctggaagatccgattgccgccctgcgtggcatggtc
accgacatcgactacgaaaactggattcgcaccaacagttccagcgacaaggccgcggac
tttcgcatgggtaacgtctggttcctgatcgaggcgttgaaaaacaccctggagaaggac
gaagacggtgagatgaccatcgaggaagccatcggcaagctggtcctgcgtgacatgctc
gaacgtcagcaggaggaagaagacggtgccgagggcgtgcagatgatgaccctgcatgcc
tccaagggcctggaattcccctacgtgttcatcatgggcatggaggaagagattcttccg
caccgttccagcatcgaagccgacaccatcgaagaagaacggcgtctggcctacgtgggc
attacccgcgcacgccagaccctggccttcacctttgcggccaagcgcaagcagtacggc
gagatcatcgattgcgcgccgagccgcttccttgacgagctgcccgacgatgacctggcc
tgggaaggcctggacgatgcgcccaccgaagtgaaggcggcgcgcggcaataatgcactg
gccgatatccgcgccatgctgaaacgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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