KEGG   Pantoea ananatis LMG 20103: PANA_3955
Entry
PANA_3955         CDS       T01195                                 
Symbol
polA
Name
(GenBank) PolA
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pam  Pantoea ananatis LMG 20103
Pathway
pam03030  DNA replication
pam03410  Base excision repair
pam03420  Nucleotide excision repair
pam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PANA_3955 (polA)
   03410 Base excision repair
    PANA_3955 (polA)
   03420 Nucleotide excision repair
    PANA_3955 (polA)
   03440 Homologous recombination
    PANA_3955 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pam03032]
    PANA_3955 (polA)
   03400 DNA repair and recombination proteins [BR:pam03400]
    PANA_3955 (polA)
Enzymes [BR:pam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PANA_3955 (polA)
DNA replication proteins [BR:pam03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PANA_3955 (polA)
DNA repair and recombination proteins [BR:pam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PANA_3955 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PANA_3955 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5
Other DBs
NCBI-ProteinID: ADD79122
UniProt: D4GEL6
Position
complement(4374238..4377024)
AA seq 928 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLVQYSPTHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIEPLHEMVRAMGLPLLAVSGVEADDVIGT
LALEAEKKGHAVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVEQKYGVPPSLIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLDKVADLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVELDQPCEALTVSEPDVNALQALFSRFEFKRWLTDLQEGKWLQGT
KSNRQAQQVLTDEPVASVEATSLLSADGYITILDQQTLDAWVEKLKNSEVFAFDLETDGL
DTLTANIVGLSFAVAPGEAAYLPVAHDYLDAPEQLDRDAVLAQLKPLLEDPDASKVGQNL
KYDRGVLKNYDIELAGIKYDTMLESYILNSVVGKHDMDSLSARWLNHKTITFEEIAGKGK
NQLTFNQIALEQAAHYAAEDADVTLQLHLKMWPELEKEAGPKKVFEQIEMPLLKVISRVE
RNGVLIDQAILAQHSKELTSRLAELELKAHELAGEPFNLSSTKQLQVILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPVSGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFVAGKGNRIVAADYSQIELRIMAHLSQDK
GLLDAFSQGEDIHRATASEVFGVPLSKVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLRYMENTRQLAASNGYVETLDGRRLWLPDIKSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIALDDWLQKQTDDAVRMIMQVHDELVFEIKAEAVDEASKQI
RALMEGSMALDVPLLVEVGVGDNWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggcgcaaatagcagaaaaccccctgattttggttgatggctcatcctatctttatcgc
gcgtaccacgctttcccgccgctaaccaacagcgcaggtgagcctactggtgcaatgtat
ggcgtgctcaacatgctgaaaagcctgttggtacagtacagccctacacatgttgctgtg
gtgtttgatgctaaaggcaaaaccttcagggatgaactgtttgaacattacaaatcccac
cgcccaccgatgcctgatgatttgcggtcacaaatagagccgctgcacgaaatggtgcgt
gcgatgggcttgccgctgttggctgtcagcggcgttgaagcggacgatgtgattggtacg
ctggcgttagaggcagagaaaaaaggccacgctgttctgattagcaccggcgataaagat
atggcgcagcttgtcacaccgggcattacgctaatcaataccatgacgaataccattctt
ggcccagaagaggttgagcagaagtatggtgtgccaccgtcgttgatcatcgattttctg
gcgatgatgggagacagctcagataatattcccggcgtacccggcgtgggtgaaaaaaca
gcccaggcgctgctgcaggggctgggcgggatgcagtccatttacgacaaccttgataaa
gtcgccgatctctcttttcgcggtgcaaaaaccatggccgcgaaactggagcagaatcgc
gatgttgcttttctttcttatcaacttgccaccattaaaacagacgtcgagctcgatcaa
ccctgtgaagcgcttacggtcagcgaacctgatgttaacgcgctgcaagcgctatttagc
cgtttcgaattcaagcgctggttgaccgacctgcaagagggaaaatggctgcagggtact
aaaagcaaccggcaagcccagcaggttcttaccgatgagccggtggcgagcgttgaggcc
accagcctgttatcggctgacggctatatcaccattctggatcagcaaaccttagatgcc
tgggtggagaagctgaaaaacagcgaggtctttgcgttcgatctcgaaaccgatgggctg
gatacgttaacggctaatatcgtcggcctcagttttgcggtagcgccaggtgaggcggct
tatctgcccgtggcacatgattaccttgatgcgccggagcagctcgaccgcgatgccgtt
cttgcccaactcaagccgctgctcgaagatcctgacgccagtaaagtggggcaaaatctc
aaatacgatcgtggcgtgctgaaaaactacgatattgaactcgccggtatcaaatatgac
accatgctggagtcatatattctgaacagcgtagtaggcaagcatgatatggacagcctg
tctgcgcggtggctgaatcataaaaccattacctttgaagagatcgccggtaaagggaaa
aatcagctcacatttaatcaaatcgctttagagcaggctgcacattacgcagcagaagat
gccgatgtcactctgcaactgcatttgaaaatgtggcctgagcttgaaaaagaagccggc
cctaaaaaggtttttgaacaaattgaaatgcccctgcttaaggtgatttcacgtgttgag
cgtaacggcgtattgatcgatcaagccattctggcgcagcactctaaagagctgacatcg
cgcctggctgagcttgagcttaaagcgcatgagctggcgggcgagccctttaatctctca
tcgaccaagcagctgcaggtcatcctgtttgaaaagcagggcattaagccgacgaagaaa
acacccggaggcgcgccttctaccagtgaagaagtcctggctgagctggcactggactat
ccgctgccaaaggtcattctggagcaccgtgggttgtcgaaactgaagtcaacttacact
gataaactgccgctgatgatcaatcctgtcagcggtcgcgtgcacacgtcctatcatcag
gcggtaacggctaccggtcgcctgtcttcaaccgatcctaacctgcaaaacatcccggtc
cgtaacgatgaaggacgccgcattcgtcaggcctttgttgcgggcaaggggaaccgtatc
gtggcggcggactattcacagattgaactgcgtatcatggcgcatctgtcacaggataaa
ggcctgctcgatgccttttcccagggagaagatattcaccgtgctactgcgtcagaggtc
tttggcgtgccgctgtctaaggtcacgggcgaacaacgtcgtagcgccaaggccatcaac
tttggtcttatctacggcatgagcgcgtttggattatctcgccagctgaacattggcgca
ggcgaagcgaaaaagtatatggatttgtacttcgagcgctatcctggcgtgctgcgctat
atggaaaacacgcgccagcttgcagccagtaacgggtatgttgaaacgctggatggacgc
cgtttgtggttgcccgacatcaagtccagtaatgccattcgtcgtaaagctgctgaacgt
gcggcgattaatgcccccatgcagggaacggccgcggatatcatcaaacgcgctatgatt
gcgctcgatgactggttacaaaagcaaaccgatgatgcggtcaggatgatcatgcaagtg
cacgatgaactggtgtttgaaatcaaagctgaagccgtcgatgaagccagcaagcagatt
cgcgcgctgatggagggcagtatggcgctggatgtccccttactggtcgaagtcggcgta
ggcgacaactgggatcaggcgcattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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