KEGG   Pantoea sp. At-9b: Pat9b_2309
Entry
Pat9b_2309        CDS       T01386                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pao  Pantoea sp. At-9b
Pathway
pao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Pat9b_2309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pao03400]
    Pat9b_2309
Enzymes [BR:pao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pat9b_2309
DNA repair and recombination proteins [BR:pao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Pat9b_2309
    RecFOR pathway proteins
     Pat9b_2309
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 AAA_16 Rad17 AAA_14 nSTAND3 TIP49 AAA_2 AAA_18 RNA_helicase AAA_17 NTPase_1 AAA_28 NB-ARC AAA_24 Bac_DnaA TsaE bpMoxR ABC_tran Sigma54_activ_2
Other DBs
NCBI-ProteinID: ADU69611
UniProt: E6WA46
Position
complement(2513980..2514984)
AA seq 334 aa
MIEADRLVSASSVNEEESLDRAIRPKLLAEYVGQPQVREQMEIFIKAAQLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVADLQHIVGRSAACLGLTLSEEGALEIARRSRGTPRIANRLLRRVRDFAEVRANG
NMSGEVSASALDMLNVDSQGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRMATQHAYRHFGIAREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagccgatcgtctggtctccgccagcagtgtcaatgaagaagagagcctcgac
cgtgccattcgtcctaagctactggcggaatatgtcggtcagccgcaggtgcgtgagcag
atggagattttcatcaaagccgcgcaactgcgtggtgacgcgctcgatcatctgttgatt
ttcggccccccgggcttgggaaaaaccacgctggccaatattgtcgccaacgagatgggc
gtcaatttgcgcaccacctctggaccggtactggagaaagcgggtgatctggccgcgatg
ctgaccaatcttgaaccgcatgatgtgctgtttattgatgagatccatcgcctgtcgccg
gtggtggaagaggtactgtatccggcaatggaagattatcagctggatatcatgattggt
gaaggcccggccgcgcgctccatcaaactggatctcccccccttcaccctgattggtgcc
acaacgcgtgccggttcgctgacctcgccgctgcgcgatcgttttggcattgtgcaacgc
cttgaattctataacgttgccgacctgcaacatattgttggtcgtagcgctgcttgcctc
ggtctgacgctgagcgaagagggcgcgttggaaatcgcccgtcgctcacgcggtacgccg
cgtattgccaaccgtctgctgcgccgtgtgcgtgacttcgccgaagtccgtgccaatggc
aatatgagcggtgaggtttccgccagcgcgctggacatgctgaatgtcgacagccagggg
tttgactatatggaccgcaagctgttgttggcgattatcgataagtttatgggtgggccg
gtggggctggataacctggcggctgccatcggtgaagaacgcgaaaccattgaagatgtg
attgaacccttcctgatccagcagggttttattcagcgcacgccgcgtggccgtatggca
acgcagcatgcgtatcgtcacttcggcattgcgcgcgaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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