KEGG   Parabacteroides sp. CT06: CI960_04825
Entry
CI960_04825       CDS       T05011                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
parc  Parabacteroides sp. CT06
Pathway
parc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:parc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CI960_04825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parc03400]
    CI960_04825
DNA repair and recombination proteins [BR:parc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CI960_04825
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CI960_04825
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Viral_helicase1 AAA_22 AAA_16
Other DBs
NCBI-ProteinID: AST52724
UniProt: A0A223HJX7
Position
1096763..1098784
AA seq 673 aa
MNFEISSSFSPTGDQPEAIAALSEGIKSGVPFQTLLGVTGSGKTFTIANVIKEVQRPTLI
LSHNKTLAAQLYSEFKAFFPNNAVEYFVSYYDYYQPEAYLPSTDTYIEKDLAINEEIDKL
RLRATASLLSGRKDVIVVSSVSCLYGMADPTAFAEKVTHLERGMRIDRDKLLRRFVDALY
VNNKLEFKSGCFRVNGDTVDIFPAIETFDGMAYRIEFWDDEIDRISSFNPLTGEEYDEQD
ELNIYPTNLFVTTQERINMAIGQIDVDLGTQVNFLKEIGKPFEAKRLYERVTFDLEMIRE
LGHCSGIENYSRYFDGRAAGDRPFCLLDYFPKDFLLVVDESHVTIPQIRAMYGGDYARKK
NLVEYGFRLPSAMDNRPLTFDEFESLTPLGIYVSATPADYELIKSEGVVVEQVIRPTGLL
DPIIDVRPSLNQIDDLMEEITQRSAKDERVLVTTLTKRMAEELTTYMTRMGVRCNYIHSD
VDTLERVQIMDDLRNGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTA
GRAARNVNGKVIFYADKITASMQQTMDETNRRREKQMAYNEAHGITPKQVMKNSVSMLAE
KQQTAEPYAYIEPEPSLVADPVVQYMNRTQLEKAIERTRKQMTEAAKKLDFIEAAQFRDE
LVKLEDLLKTKKD
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaattttgaaatatcgtcttcgttcagtcccacgggtgaccaacccgaggcgattgcg
gcgttgtcggaagggatcaagagtggtgttcctttccagacacttttgggtgttaccggt
tccggtaagacgtttacgatcgctaacgtgataaaggaagttcagagaccgaccttgata
ctcagtcataataagacgcttgccgctcagttgtacagtgagtttaaagcgtttttccca
aataatgcggtagagtactttgtctcttattatgattattaccaaccggaggcctatcta
ccttctaccgatacctatatagagaaagacttggcgatcaatgaggagatcgataagctg
cgtttgagggccacggcttccttattgtcgggtcgtaaggacgtgatcgtggtctcatcc
gtatcctgcttatatggcatggcagaccctacggctttcgccgagaaagtgacgcatctg
gaacggggtatgcgtatcgaccgggataagctgttgcgccggtttgtagacgccttgtac
gtgaataataagctggagttcaaaagcggctgtttccgtgtgaatggtgatacggtggat
attttcccggcgatcgagaccttcgacggcatggcgtaccgtatcgagttctgggatgat
gagatagaccgcatctcctctttcaatccgttgacaggcgaggagtatgatgagcaagat
gagctgaatatttatcctaccaatttattcgtgaccacccaagagcgtatcaatatggcg
atcggtcagatcgatgtggatctggggacgcaggtgaatttcctcaaggagatcggtaag
cccttcgaggcgaaacgcctgtatgagcgtgtcacgtttgatctggaaatgatccgggag
ctagggcattgctcgggtatcgagaactattcccgttatttcgacggacgcgcggcggga
gatcgtcctttctgcctgttggattatttcccgaaagacttcctgcttgtcgtagacgag
agccatgtgacgatcccgcagattcgtgcgatgtatggcggggattatgcccggaagaaa
aacttggtggagtatggtttccgtttgccctcggcgatggataaccgtccgcttaccttc
gatgagttcgagtcgttgacgcctctaggcatttatgtgagcgctactcccgccgattac
gagttgataaagagcgagggagtggtggtggagcaggtgatacgtccgacaggcctgctg
gacccgattatcgatgtccgtccttcattaaaccaaatcgacgacttgatggaggagatc
acgcagcgctcggcaaaagacgaacgagtcttggtgactaccttgaccaagcgtatggcg
gaagagctgactacgtatatgacccgcatgggggtacgatgcaactatatacatagcgat
gtagataccttggaacgtgtacagattatggacgacctgcggaatggcctgtttgatgtg
ctgatcggtgtcaatctgctacgcgaggggctggatttaccggaagtctcgttggtcgct
atcttggatgcggataaggaaggctttttgcgttcccaccgatccttgacgcagacagct
ggacgtgccgcccgaaacgtgaatggaaaggttatcttctatgccgataagatcacggcg
agtatgcagcagaccatggacgagaccaatcgccggcgggagaaacagatggcttataac
gaggcgcatggcattactccgaagcaagtcatgaaaaacagtgtatccatgcttgccgag
aaacaacaaacggcggagccttacgcttatatagagccggaaccaagcttggtagcggac
ccggtcgtgcaatacatgaaccgtacgcagcttgagaaggcgatcgagcggactcgcaaa
cagatgacggaagcagcgaagaaactggatttcatcgaggctgcccaattccgtgacgag
ctggtgaaattggaggatttactgaaaacgaaaaaggattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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