KEGG   Parabacteroides sp. CT06: CI960_07145
Entry
CI960_07145       CDS       T05011                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_07145
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:parc02022]
    CI960_07145
Two-component system [BR:parc02022]
 NtrC family
  HydH-HydG (metal tolerance)
   CI960_07145
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_16 AAA_2 Mg_chelatase MCM AAA_22 HTH_30 AAA_19 AAA_3 AAA_14 HTH_28 HTH_29 TadZ_N UBA
Other DBs
NCBI-ProteinID: AST53138
UniProt: A0A223HL52
Position
1645785..1647104
AA seq 439 aa
MLSILIVEDDITFSLMLTTWLGKKGFVVRSSSSVSDAKRRLGEEAFDLVISDLRLPDSDG
IDLLKWLKSTHPSLPLIMMTSYAEIQTAVQAMKLGAADYIAKPLNPDELLGKIKELVYVE
EKAPARVPVSSAPDLYIEGQSQAARQLYEHVRLVAPTDMSVLVTGASGTGKEYIARRIHE
QSNRSKAPFVAVDCGAIPKELAASEFFGHVKGSFTGAIENKTGAFVAAQGGTIFLDEIGN
LTYEVQVQLLRALQERKVKPIGSNQEIAINVRLISATNENLRQAIEKGDFREDLYHRINE
FTIRIPDLKERKEDLLLFANHFLDLANSELQKDIIGFDNDTMQLFQSYSWPGNLRQMKNV
IKYATLLATGRYITRKELPEELTENLSSHTNIQLKNVEHERDLIRKALQECGNNKTRAAQ
LLGIDRKTLYNKLKIYQLD
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgttgtcgattctaatcgttgaagatgatataactttttccttgatgcttaccacatgg
ctgggtaagaaagggtttgtcgtaagatcctcgtcctctgtttccgatgctaaacggagg
ctgggggaggaagcgttcgatttggttatatcggatttacgcctgccggatagtgacggg
atcgacttattgaaatggctgaaaagcactcatccttccttaccccttatcatgatgacc
agttatgcggagatacaaacggcggttcaggcgatgaagctgggagcggcggattatatt
gccaagccgttgaacccggatgagttgctgggtaagatcaaggaacttgtgtacgtggag
gagaaggctccggcgagagtcccggtttcttcggccccggatctttatatcgaggggcag
agccaagcggcccgccagctttatgagcatgtgcgtttggtggctccgacggatatgtcg
gtattggtgaccggcgctagcggtaccggtaaggagtatatcgcccgtcggatccacgag
caaagtaatcgtagcaaggctccgtttgtcgccgtggattgcggcgctatccccaaggaa
ttggcggcttccgagttcttcggccacgtgaaaggttcttttacgggggcgatcgagaac
aagactggggcgtttgtggcggctcaaggcggtacgatatttttggatgagatcgggaac
ctgacgtatgaggtacaggttcagctattgcgtgccctacaggagcgcaaggtaaagccg
atcgggagcaatcaggagatcgctatcaacgtgcgcttgatatccgcaacgaacgagaac
ttgcggcaggcgatcgagaaaggagatttccgtgaggacctgtaccatcgtatcaatgag
ttcacgatccgtatcccggacttgaaagagcgaaaagaggatttgctcttgttcgccaat
cattttctcgatctggcgaatagcgagctccagaaagatatcatcggtttcgacaacgat
accatgcaattgttccaatcttattcttggccgggtaacctgcggcagatgaagaacgtt
atcaagtacgctaccttattggcgaccggtcgatacatcacccgcaaggaactcccggag
gaactgacggagaacctctcttcgcacaccaacatccagcttaagaacgtggagcatgaa
cgtgaccttatccgtaaggccctccaagagtgcggcaataataagactcgtgcggcccag
ttattgggcatcgaccggaagacgctttacaataagctgaagatttatcagttggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system