KEGG   Paraglaciecola sp. T6c: Patl_1335
Entry
Patl_1335         CDS       T00372                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
pat  Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:pat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pat03009]
    Patl_1335
Enzymes [BR:pat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Patl_1335
Ribosome biogenesis [BR:pat03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Patl_1335
SSDB
Motif
Pfam: PseudoU_synth_2 S4 NepR
Other DBs
NCBI-ProteinID: ABG39861
UniProt: A0A9J9B8P7
Position
1599127..1600110
AA seq 327 aa
MSTSYEKIQLQAVVPQTLLGKRLDQALAEMFPDYSRSRIKDWILADQVAVDGQIVNKPRE
KLLGEELIEIDASIEIQERHSAQEIELNIVYEDEHILVINKPTNLVVHPGAGNASGTILN
ALLSHVPEIASVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVEKLQAREISREYEAVVYG
NLIAGGSVDEPIGRHPTKRTSMAVVQSGKPALTHYRVKHKYRAHTHLRLKLESGRTHQIR
VHMAHLRHPLVGDQAYGGRPRLPKAASELMIETIRGFKRQALHAIQLELEHPITGEWMSF
QAPLPDDFVNLLDVLKEDTAQNPDDLV
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtctaccagctatgaaaaaatacaactacaggccgtggtgccgcaaacgttattaggt
aaacgtttggatcaagctttggctgaaatgttccctgattattcgcgatctcgtataaaa
gattggattttggcggatcaagttgccgttgatggtcagatagtgaacaagccaagagaa
aaattgcttggtgaagagttaattgaaattgatgccagtattgagatacaagagcgtcac
agcgcacaagaaattgagctaaacattgtttacgaagatgagcatattttagtcataaac
aaaccaaccaatttggttgttcatccgggggcgggcaatgcgagtggcactattttaaat
gcattgctaagccacgtgcctgagattgccagtgtgccccgcgctggtatcgtccatcga
ttagataaagacaccacgggtttgatggtggtagccaaaacgataccagcacaaacacat
ttagttgaaaagctgcaagcgcgtgaaatcagccgcgagtatgaagctgtcgtatacggt
aacttgattgctggtggcagtgttgatgagcctatcggtcgtcatccgactaagcgcacc
agcatggcagtagtgcaatctggtaagccagcgttaacccattatcgggttaaacataag
taccgggcgcatacgcatttacgcttaaaactagaatcgggtcgtacccatcaaatacgc
gtgcacatggcacatttacgtcaccctttggtgggcgaccaagcttacggtggtcgtcct
cgattaccaaaagcggcaagcgaattgatgatagaaacgattcgtggctttaagcgccaa
gctttacacgccatccagttagagcttgaacatccaatcacaggagagtggatgtctttt
caagcgccgttgcccgacgattttgttaacttgttggacgtgttaaaagaagacacggca
caaaatccggatgatcttgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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