KEGG   PATHWAY: afd00970
Entry
afd00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Alistipes finegoldii
Class
Genetic Information Processing; Translation
Pathway map
afd00970  Aminoacyl-tRNA biosynthesis
afd00970

Organism
Alistipes finegoldii [GN:afd]
Gene
Alfi_0051  tRNA-Ala [KO:K14218]
Alfi_1948  tRNA-Ala [KO:K14218]
Alfi_0449  tRNA-Arg [KO:K14219]
Alfi_0177  tRNA-Arg [KO:K14219]
Alfi_2053  tRNA-OTHER [KO:K14219]
Alfi_2521  tRNA-Arg [KO:K14219]
Alfi_0858  tRNA-Asn [KO:K14220]
Alfi_3030  tRNA-Asp [KO:K14221]
Alfi_3031  tRNA-Asp [KO:K14221]
Alfi_1523  tRNA-Cys [KO:K14222]
Alfi_0334  tRNA-Gln [KO:K14223]
Alfi_2775  tRNA-Gln [KO:K14223]
Alfi_1119  tRNA-Glu [KO:K14224]
Alfi_1840  tRNA-Glu [KO:K14224]
Alfi_3182  tRNA-Gly [KO:K14225]
Alfi_1223  tRNA-Gly [KO:K14225]
Alfi_3222  tRNA-Gly [KO:K14225]
Alfi_2041  tRNA-Gly [KO:K14225]
Alfi_0224  tRNA-OTHER [KO:K14225]
Alfi_0659  tRNA-OTHER [KO:K14225]
Alfi_0949  tRNA-His [KO:K14226]
Alfi_1947  tRNA-Ile [KO:K14227]
Alfi_1834  tRNA-Leu [KO:K14228]
Alfi_3217  tRNA-Leu [KO:K14228]
Alfi_1944  tRNA-Leu [KO:K14228]
Alfi_1611  tRNA-Leu [KO:K14228]
Alfi_2245  tRNA-Leu [KO:K14228]
Alfi_2612  tRNA-OTHER [KO:K14229]
Alfi_2628  tRNA-Lys [KO:K14229]
Alfi_3013  tRNA-Lys [KO:K14229]
Alfi_2105  tRNA-Met [KO:K14230]
Alfi_2033  tRNA-Met [KO:K14230]
Alfi_0782  tRNA-Met [KO:K14230]
Alfi_2974  tRNA-Met [KO:K14230]
Alfi_0283  tRNA-Phe [KO:K14231]
Alfi_2915  tRNA-Pro [KO:K14232]
Alfi_1115  tRNA-Pro [KO:K14232]
Alfi_2916  tRNA-Pro [KO:K14232]
Alfi_2057  tRNA-Ser [KO:K14233]
Alfi_2725  tRNA-Ser [KO:K14233]
Alfi_1761  tRNA-Ser [KO:K14233]
Alfi_1781  tRNA-Ser [KO:K14233]
Alfi_2039  tRNA-Thr [KO:K14234]
Alfi_1181  tRNA-Thr [KO:K14234]
Alfi_1290  tRNA-Thr [KO:K14234]
Alfi_1903  tRNA-OTHER [KO:K14234]
Alfi_2043  tRNA-Trp [KO:K14235]
Alfi_2040  tRNA-Tyr [KO:K14236]
Alfi_0857  tRNA-Val [KO:K14237]
Alfi_0846  tRNA-Val [KO:K14237]
Alfi_0802  tRNA-Val [KO:K14237]
Alfi_2658  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
Alfi_2675  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Alfi_2952  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Alfi_0375  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Alfi_2343  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
Alfi_0250  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
Alfi_1147  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Alfi_0352  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Alfi_0361  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Alfi_1491  protein containing C-terminal region/beta chain of methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Alfi_3266  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Alfi_2457  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Alfi_1697  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Alfi_2452  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Alfi_1747  lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
Alfi_2815  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Alfi_1784  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Alfi_3151  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Alfi_1485  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Alfi_3174  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
Alfi_1156  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Alfi_2466  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
afd00250  Alanine, aspartate and glutamate metabolism
afd00260  Glycine, serine and threonine metabolism
afd00270  Cysteine and methionine metabolism
afd00290  Valine, leucine and isoleucine biosynthesis
afd00300  Lysine biosynthesis
afd00330  Arginine and proline metabolism
afd00340  Histidine metabolism
afd00380  Tryptophan metabolism
afd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG GENES (73)   
All databases (74)   

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