KEGG   PATHWAY: ali00630
Entry
ali00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum lipoferum
Class
Metabolism; Carbohydrate metabolism
Pathway map
ali00630  Glyoxylate and dicarboxylate metabolism
ali00630

Module
ali_M00012  Glyoxylate cycle [PATH:ali00630]
ali_M00621  Glycine cleavage system [PATH:ali00630]
ali_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ali00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum lipoferum [GN:ali]
Gene
AZOLI_p40649  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AZOLI_p10191  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
AZOLI_p10640  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AZOLI_2526  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AZOLI_p30247  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
AZOLI_0237  aceB; malate synthase [KO:K01638] [EC:2.3.3.9]
AZOLI_0207  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AZOLI_1088  gltA1; citrate synthase [KO:K01647] [EC:2.3.3.1]
AZOLI_p50235  gltA2; citrate synthase [KO:K01647] [EC:2.3.3.1]
AZOLI_2533  acnA; Aconitase [KO:K01681] [EC:4.2.1.3]
AZOLI_p30282  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AZOLI_2388  phbA3; Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
AZOLI_p10676  phbA2; Acetyl-CoA acetyltransferase with thiolase domain (Beta-ketothiolase) [KO:K00626] [EC:2.3.1.9]
AZOLI_p30161  phbA4; Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
AZOLI_p10029  atoB; acetyl-CoA acetyltransferase with thiolase domain [KO:K00626] [EC:2.3.1.9]
AZOLI_2387  phbB3; acetoacetyl-coA reductase [KO:K00023] [EC:1.1.1.36]
AZOLI_0508  Putative acyl dehydratase [KO:K17865] [EC:4.2.1.55]
AZOLI_2188  mce; Methylmalonyl-CoA/ethylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AZOLI_p30501  propionyl-CoA carboxylase alpha chain, biotin-carrying subunit [KO:K01965] [EC:6.4.1.3]
AZOLI_p30502  propionyl-CoA carboxylase beta chain [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AZOLI_p30500  mutB; adenosylcobalamin-dependent methylmalonyl-CoA mutase large subunit [KO:K01847] [EC:5.4.99.2]
AZOLI_0349  glcD; glycolate oxidase, subunit GlcD [KO:K00104] [EC:1.1.99.14]
AZOLI_0350  glcE; glycolate oxidase, subunit GlcE [KO:K11472] [EC:1.1.99.14]
AZOLI_0351  glcF; Glycolate oxidase, iron-sulfur subunit GlcF [KO:K11473] [EC:1.1.99.14]
AZOLI_p30387  katA; catalase (hydroperoxidase II) [KO:K03781] [EC:1.11.1.6]
AZOLI_2757  2-oxo/hydroxy acid reductase [KO:K00015] [EC:1.1.1.26]
AZOLI_p10924  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AZOLI_0092  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AZOLI_p20254  hprA; glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
AZOLI_p20224  cbbZ1; Phosphoglycolate phosphatase (PGPase) (PGP) [KO:K01091] [EC:3.1.3.18]
AZOLI_1301  putative phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZOLI_1348  Putative phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZOLI_p10715  cbbZ2; 2-Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZOLI_2172  putative phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZOLI_p10724  cbbL; Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) [KO:K01601] [EC:4.1.1.39]
AZOLI_p10723  cbbS; Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) [KO:K01602] [EC:4.1.1.39]
AZOLI_1867  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AZOLI_p30340  puuA; gamma-Glu-putrescine synthase [KO:K01915] [EC:6.3.1.2]
AZOLI_0862  glyA2; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AZOLI_p10855  glyA1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AZOLI_1254  gcvPA; Glycine cleavage system P-protein, subunit 1 [KO:K00282] [EC:1.4.4.2]
AZOLI_1255  gcvPB; Glycine cleavage system P-protein, subunit 2 [KO:K00283] [EC:1.4.4.2]
AZOLI_1252  gcvT; glycine cleavage system T-protein (aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
AZOLI_2619  lpdA1; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AZOLI_1333  lpdA2; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AZOLI_1253  gcvH; Glycine cleavage system H-protein [KO:K02437]
AZOLI_p10310  gcl; Glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AZOLI_p40227  hyi1; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AZOLI_p40225  glxR1; tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
AZOLI_p40224  hydroxypyruvate reductase; glycerate kinase [KO:K11529] [EC:2.7.1.165]
AZOLI_p20255  glycerate kinase; hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AZOLI_p10927  ttuC; Tartrate dehydrogenase/decarboxylase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AZOLI_p50154  kdgA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AZOLI_p10072  fdsD; formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
AZOLI_0634  fdhA1; Formate dehydrogenase, A subunit [KO:K00123] [EC:1.17.1.9]
AZOLI_p10713  fdhA; Tungsten-containing formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
AZOLI_p10070  fdsA; Formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
AZOLI_p40297  fdhA2; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
AZOLI_p10714  fdhB; Tungsten-containing formate dehydrogenase, beta subunit [KO:K22515] [EC:1.17.1.9]
AZOLI_0635  fdhB1; Formate dehydrogenase, beta (iron-sulfur) subunit [KO:K00124]
AZOLI_p10069  fdsB; formate dehydrogenase beta subunit [KO:K00124]
AZOLI_p40298  fdhB2; Formate dehydrogenase, beta (iron-sulfur) subunit [KO:K00124]
AZOLI_0637  fdnI1; formate dehydrogenase, gamma subunit [KO:K00127]
AZOLI_p10068  fdsG; formate dehydrogenase gamma subunit [KO:K00127]
AZOLI_p40299  fdnI2; Formate dehydrogenase, gamma subunit [KO:K00127]
AZOLI_p20249  putative arylformamidase (kynurenine formamidase) [KO:K01432] [EC:3.5.1.9]
AZOLI_p11036  putative esterase [KO:K01432] [EC:3.5.1.9]
AZOLI_p10332  purU2; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AZOLI_p10862  purU1; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AZOLI_p30449  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
AZOLI_1200  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
AZOLI_p10318  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ali00010  Glycolysis / Gluconeogenesis
ali00020  Citrate cycle (TCA cycle)
ali00030  Pentose phosphate pathway
ali00053  Ascorbate and aldarate metabolism
ali00071  Fatty acid degradation
ali00230  Purine metabolism
ali00250  Alanine, aspartate and glutamate metabolism
ali00260  Glycine, serine and threonine metabolism
ali00620  Pyruvate metabolism
ali00710  Carbon fixation in photosynthetic organisms
ali00750  Vitamin B6 metabolism
ali00910  Nitrogen metabolism
KO pathway
ko00630   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG GENES (72)   
All databases (73)   

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