KEGG   PATHWAY: ara00970
Entry
ara00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhizobium rhizogenes K84
Class
Genetic Information Processing; Translation
Pathway map
ara00970  Aminoacyl-tRNA biosynthesis
ara00970

Organism
Rhizobium rhizogenes K84 [GN:ara]
Gene
Arad_5003  tRNA-Ala [KO:K14218]
Arad_5001  tRNA-Ala [KO:K14218]
Arad_5005  tRNA-Ala [KO:K14218]
Arad_5034  tRNA-Ala [KO:K14218]
Arad_5007  tRNA-Arg [KO:K14219]
Arad_5023  tRNA-Arg [KO:K14219]
Arad_5025  tRNA-Arg [KO:K14219]
Arad_5029  tRNA-Arg [KO:K14219]
Arad_5020  tRNA-Asn [KO:K14220]
Arad_5014  tRNA-Asp [KO:K14221]
Arad_5015  tRNA-Asp [KO:K14221]
Arad_5045  tRNA-Cys [KO:K14222]
Arad_5032  tRNA-Gln [KO:K14223]
Arad_5010  tRNA-Gln [KO:K14223]
Arad_5042  tRNA-Glu [KO:K14224]
Arad_5044  tRNA-Glu [KO:K14224]
Arad_5043  tRNA-Glu [KO:K14224]
Arad_5030  tRNA-Gly [KO:K14225]
Arad_5018  tRNA-Gly [KO:K14225]
Arad_5008  tRNA-Gly [KO:K14225]
Arad_5009  tRNA-His [KO:K14226]
Arad_5000  tRNA-Ile [KO:K14227]
Arad_5004  tRNA-Ile [KO:K14227]
Arad_5033  tRNA-Ile [KO:K14227]
Arad_5046  tRNA-Leu [KO:K14228]
Arad_5028  tRNA-Leu [KO:K14228]
Arad_5040  tRNA-Leu [KO:K14228]
Arad_5049  tRNA-Leu [KO:K14228]
Arad_5021  tRNA-Leu [KO:K14228]
Arad_5039  tRNA-Lys [KO:K14229]
Arad_5024  tRNA-Lys [KO:K14229]
Arad_5037  tRNA-Met [KO:K14230]
Arad_5002  tRNA-Met [KO:K14230]
Arad_5006  tRNA-Met [KO:K14230]
Arad_5035  tRNA-Met [KO:K14230]
Arad_5038  tRNA-Met [KO:K14230]
Arad_5036  tRNA-Phe [KO:K14231]
Arad_5011  tRNA-Pro [KO:K14232]
Arad_5013  tRNA-Pro [KO:K14232]
Arad_5022  tRNA-Pro [KO:K14232]
Arad_5050  tRNA-Ser [KO:K14233]
Arad_5031  tRNA-Ser [KO:K14233]
Arad_5041  tRNA-Ser [KO:K14233]
Arad_5012  tRNA-Ser [KO:K14233]
Arad_5048  tRNA-Thr [KO:K14234]
Arad_5016  tRNA-Thr [KO:K14234]
Arad_5027  tRNA-Thr [KO:K14234]
Arad_5019  tRNA-Trp [KO:K14235]
Arad_5017  tRNA-Tyr [KO:K14236]
Arad_5026  tRNA-Val [KO:K14237]
Arad_5047  tRNA-Val [KO:K14237]
Arad_3953  gltX1; glutamyl-tRNA synthetase protein [KO:K01885] [EC:6.1.1.17]
Arad_0379  gatA1; glutamyl-tRNA amidotransferase subunit A protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Arad_1909  gatA2; glutamyl-tRNA amidotransferase subunit A protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Arad_8560  gatA1; glutamyl-tRNA amidotransferase subunit A protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Arad_9340  gatA1; glutamyl-tRNA amidotransferase subunit A protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Arad_7518  amidase family protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Arad_1914  gatB; glutamyl-tRNA amidotransferase subunit B protein [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Arad_1908  gatC; glutamyl-tRNA amidotransferase subunit C protein [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Arad_2617  alaS2; alanyl-tRNA synthetase protein [KO:K01872] [EC:6.1.1.7]
Arad_1734  aspS; aspartyl-tRNA synthetase protein [KO:K01876] [EC:6.1.1.12]
Arad_15004  agnA; Agrocin84-synthetase [KO:K01893] [EC:6.1.1.22]
Arad_3833  tRNA synthetase class II (G H P and S) [KO:K01880] [EC:6.1.1.14]
Arad_1148  glyQ; glycyl-tRNA synthetase [KO:K01878] [EC:6.1.1.14]
Arad_1155  glyS; glycyl-tRNA synthetase [KO:K01879] [EC:6.1.1.14]
Arad_2472  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Arad_2130  serS; seryl-tRNA synthetase (serine-tRNA ligase) protein [KO:K01875] [EC:6.1.1.11]
Arad_7947  selA; L-seryl-tRNA(ser) selenium transferase protein [KO:K01042] [EC:2.9.1.1]
Arad_1637  cysS; cysteinyl-tRNA synthetase protein [KO:K01883] [EC:6.1.1.16]
Arad_2417  metS; methionyl-tRNA synthetase protein [KO:K01874] [EC:6.1.1.10]
Arad_9863  metS; methionyl-tRNA synthetase protein [KO:K01874] [EC:6.1.1.10]
Arad_0679  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Arad_2111  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Arad_4935  leuS; leucyl-tRNA synthetase protein [KO:K01869] [EC:6.1.1.4]
Arad_15002  agnB2; Agrocin 84-resistant leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Arad_1078  ileS; isoleucyl-tRNA synthetase protein [KO:K01870] [EC:6.1.1.5]
Arad_3954  lysS; lysyl-tRNA synthetase protein [KO:K04567] [EC:6.1.1.6]
Arad_2119  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Arad_1870  proS; prolyl-tRNA synthetase protein [KO:K01881] [EC:6.1.1.15]
Arad_1055  hisS; histidyl-tRNA synthetase protein [KO:K01892] [EC:6.1.1.21]
Arad_0444  pheS; phenylalanyl-tRNA synthetase [KO:K01889] [EC:6.1.1.20]
Arad_0445  pheT; phenylalanyl-tRNA synthetase [KO:K01890] [EC:6.1.1.20]
Arad_2548  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Arad_2622  trpS; tryptophanyl-tRNA synthetase protein [KO:K01867] [EC:6.1.1.2]
Arad_0647  trpS; tryptophanyl-tRNA synthetase protein [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ara00250  Alanine, aspartate and glutamate metabolism
ara00260  Glycine, serine and threonine metabolism
ara00270  Cysteine and methionine metabolism
ara00290  Valine, leucine and isoleucine biosynthesis
ara00300  Lysine biosynthesis
ara00330  Arginine and proline metabolism
ara00340  Histidine metabolism
ara00380  Tryptophan metabolism
ara00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (85)   
   KEGG GENES (85)   
All databases (86)   

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