KEGG   PATHWAY: ath00730
Entry
ath00730                    Pathway                                
Name
Thiamine metabolism - Arabidopsis thaliana (thale cress)
Class
Metabolism; Metabolism of cofactors and vitamins
Pathway map
ath00730  Thiamine metabolism
ath00730

Module
ath_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:ath00730]
ath_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ath00730]
Other DBs
GO: 0006772
Organism
Arabidopsis thaliana (thale cress) [GN:ath]
Gene
AT2G29630  THIC; thiaminC [KO:K03147] [EC:4.1.99.17]
AT1G22940  TH1; thiamine biosynthesis protein [KO:K14153] [EC:2.7.1.49 2.7.4.7 2.5.1.3]
AT5G65720  NFS1; nitrogen fixation S (NIFS)-like 1 [KO:K04487] [EC:2.8.1.7]
AT3G21500  DXPS1; 1-deoxy-D-xylulose 5-phosphate synthase 1 [KO:K01662] [EC:2.2.1.7]
AT4G15560  CLA1; Deoxyxylulose-5-phosphate synthase [KO:K01662] [EC:2.2.1.7]
AT5G11380  DXPS3; 1-deoxy-D-xylulose 5-phosphate synthase 3 [KO:K01662] [EC:2.2.1.7]
AT5G54770  THI1; thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) [KO:K03146] [EC:2.4.2.60]
AT3G24030  hydroxyethylthiazole kinase family protein [KO:K00878] [EC:2.7.1.50]
AT5G66005  uncharacterized protein [KO:K06928] [EC:3.6.1.15]
AT1G67440  emb1688; Minichromosome maintenance (MCM2/3/5) family protein [KO:K06949] [EC:3.6.1.- 3.1.3.100]
AT5G32470  heme oxygenase-like, multi-helical [KO:K22911] [EC:3.1.3.100 3.5.99.-]
AT2G44750  TPK2; thiamine pyrophosphokinase 2 [KO:K00949] [EC:2.7.6.2]
AT1G02880  TPK1; thiamine pyrophosphokinase1 [KO:K00949] [EC:2.7.6.2]
AT5G47840  AMK2; adenosine monophosphate kinase [KO:K00939] [EC:2.7.4.3]
AT5G50370  Adenylate kinase family protein [KO:K00939] [EC:2.7.4.3]
AT5G63400  ADK1; adenylate kinase 1 [KO:K00939] [EC:2.7.4.3]
AT5G35170  adenylate kinase family protein [KO:K00939] [EC:2.7.4.3]
AT2G39270  P-loop containing nucleoside triphosphate hydrolases superfamily protein [KO:K00939] [EC:2.7.4.3]
AT2G37250  ADK; adenosine kinase [KO:K00939] [EC:2.7.4.3]
AT3G01820  P-loop containing nucleoside triphosphate hydrolases superfamily protein [KO:K00939] [EC:2.7.4.3]
AT3G16990  heme oxygenase-like, multi-helical [KO:K20896] [EC:3.5.1.- 3.5.99.-]
Compound
C00003  NAD+
C00018  Pyridoxal phosphate
C00022  Pyruvate
C00037  Glycine
C00068  Thiamin diphosphate
C00082  L-Tyrosine
C00097  L-Cysteine
C00118  D-Glyceraldehyde 3-phosphate
C00378  Thiamine
C01081  Thiamin monophosphate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C02892  Thiamine acetic acid
C03028  Thiamin triphosphate
C03373  Aminoimidazole ribotide
C04294  5-(2-Hydroxyethyl)-4-methylthiazole
C04327  4-Methyl-5-(2-phosphooxyethyl)thiazole
C04556  4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine
C04752  4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate
C05856  Thiamine aldehyde
C11437  1-Deoxy-D-xylulose 5-phosphate
C15809  Iminoglycine
C15810  Sulfur-carrier protein
C15811  [Enzyme]-cysteine
C15812  [Enzyme]-S-sulfanylcysteine
C15813  Adenylyl-[sulfur-carrier protein]
C15814  Thiocarboxy-[sulfur-carrier protein]
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20246  2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
C20247  2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate
C20267  4-Amino-5-aminomethyl-2-methylpyrimidine
C20784  ADP-5-ethyl-4-methylthiazole-2-carboxylate
Reference
PMID:15614489
  Authors
Kawasaki Y, Onozuka M, Mizote T, Nosaka K.
  Title
Biosynthesis of hydroxymethylpyrimidine pyrophosphate in Saccharomyces cerevisiae.
  Journal
Curr Genet 47:156-62 (2005)
DOI:10.1007/s00294-004-0557-x
Reference
PMID:14567704
  Authors
Park JH, Dorrestein PC, Zhai H, Kinsland C, McLafferty FW, Begley TP.
  Title
Biosynthesis of the thiazole moiety of thiamin pyrophosphate (vitamin B1).
  Journal
Biochemistry 42:12430-8 (2003)
DOI:10.1021/bi034902z
Reference
PMID:22616866
  Authors
Begley TP, Ealick SE, McLafferty FW
  Title
Thiamin biosynthesis: still yielding fascinating biological chemistry.
  Journal
Biochem Soc Trans 40:555-60 (2012)
DOI:10.1042/BST20120084
Reference
PMID:12777485
  Authors
Wightman R, Meacock PA
  Title
The THI5 gene family of Saccharomyces cerevisiae: distribution of homologues among the hemiascomycetes and functional redundancy in the aerobic biosynthesis of thiamin from pyridoxine.
  Journal
Microbiology 149:1447-60 (2003)
DOI:10.1099/mic.0.26194-0
Reference
PMID:22031445
  Authors
Chatterjee A, Abeydeera ND, Bale S, Pai PJ, Dorrestein PC, Russell DH, Ealick SE, Begley TP
  Title
Saccharomyces cerevisiae THI4p is a suicide thiamine thiazole synthase.
  Journal
Nature 478:542-6 (2011)
DOI:10.1038/nature10503
Reference
PMID:19348578
  Authors
Jurgenson CT, Begley TP, Ealick SE
  Title
The structural and biochemical foundations of thiamin biosynthesis.
  Journal
Annu Rev Biochem 78:569-603 (2009)
DOI:10.1146/annurev.biochem.78.072407.102340
Related
pathway
ath00010  Glycolysis / Gluconeogenesis
ath00230  Purine metabolism
ath00260  Glycine, serine and threonine metabolism
ath00270  Cysteine and methionine metabolism
ath00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ath00750  Vitamin B6 metabolism
KO pathway
ko00730   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG GENES (21)   
All databases (22)   

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