KEGG   PATHWAY: ath03020
Entry
ath03020                    Pathway                                
Name
RNA polymerase - Arabidopsis thaliana (thale cress)
Class
Genetic Information Processing; Transcription
Pathway map
ath03020  RNA polymerase
ath03020

Other DBs
GO: 0000428
Organism
Arabidopsis thaliana (thale cress) [GN:ath]
Gene
ArthCp014  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
ArthCp013  rpoC1; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
ArthCp012  rpoC2; RNA polymerase beta'' subunit [KO:K03046] [EC:2.7.7.6]
ArthCp055  rpoA; RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
AT4G21710  NRPB2; DNA-directed RNA polymerase family protein [KO:K03010] [EC:2.7.7.6]
AT4G35800  NRPB1; RNA polymerase II large subunit [KO:K03006] [EC:2.7.7.6]
AT2G15430  NRPB3; DNA-directed RNA polymerase family protein [KO:K03011]
AT2G15400  NRPE3B; DNA-directed RNA polymerase family protein [KO:K03011]
AT3G52090  NRPB11; DNA-directed RNA polymerase, RBP11-like protein [KO:K03008]
AT5G09920  NRPB4; RNA polymerase II, Rpb4, core protein [KO:K03012]
AT5G59180  NRPB7; DNA-directed RNA polymerase II [KO:K03015]
AT3G16980  NRPB9A; RNA polymerases M/15 Kd subunit [KO:K03017]
AT4G16265  NRPB9B; RNA polymerases M/15 Kd subunit [KO:K03017]
AT5G45140  NRPC2; nuclear RNA polymerase C2 [KO:K03021] [EC:2.7.7.6]
AT5G60040  NRPC1; nuclear RNA polymerase C1 [KO:K03018] [EC:2.7.7.6]
AT2G29540  RPC14; RNApolymerase 14 kDa subunit [KO:K03020]
AT1G60620  RPAC43; RNA polymerase I subunit 43 [KO:K03027]
AT1G60850  ATRPAC42; DNA-directed RNA polymerase family protein [KO:K03027]
AT3G49000  RNA polymerase III subunit RPC82 family protein [KO:K03023]
AT4G25180  RNA polymerase III RPC4 [KO:K03026]
AT5G09380  RNA polymerase III RPC4 [KO:K03026]
AT5G49530  SIN-like family protein [KO:K14721]
AT5G23710  DNA binding / DNA-directed RNA polymerase [KO:K03025]
AT4G01590  DNA-directed RNA polymerase III subunit [KO:K03024]
AT1G06790  RNA polymerase Rpb7 N-terminal domain-containing protein [KO:K03022]
AT3G28956  RNA polymerase II, Rpb4, core protein [KO:K25304]
AT1G01210  DNA-directed RNA polymerase, subunit M, archaeal [KO:K03019]
AT4G07950  DNA-directed RNA polymerase, subunit M, archaeal [KO:K03019]
AT1G29940  NRPA2; nuclear RNA polymerase A2 [KO:K03002] [EC:2.7.7.6]
AT3G57660  NRPA1; nuclear RNA polymerase A1 [KO:K02999] [EC:2.7.7.6]
AT3G25940  TFIIB zinc-binding protein [KO:K03000]
AT3G13940  DNA binding / DNA-directed RNA polymerase [KO:K03005]
AT3G22320  NRPB5; Eukaryotic rpb5 RNA polymerase subunit family protein [KO:K03013]
AT2G41340  RPB5D; RNA polymerase II fifth largest subunit, D [KO:K03013]
AT3G54490  RPB5E; RNA polymerase II fifth largest subunit, E [KO:K03013]
AT3G57080  NRPE5; Eukaryotic rpb5 RNA polymerase subunit family protein [KO:K03013]
AT5G57980  RPB5C; RNA polymerase II fifth largest subunit, C [KO:K03013]
AT5G51940  NRPB6A; RNA polymerase Rpb6 [KO:K03014]
AT2G04630  NRPB6B; RNA polymerase Rpb6 [KO:K03014]
AT3G59600  NRPB8B; RNA polymerase Rpb8 [KO:K03016]
AT1G54250  NRPB8A; RNA polymerase Rpb8 [KO:K03016]
AT5G41010  NRPB12; DNA directed RNA polymerase, 7 kDa subunit [KO:K03009]
AT1G53690  DNA directed RNA polymerase, 7 kDa subunit [KO:K03009]
AT1G61700  RNA polymerases N / 8 kDa subunit [KO:K03007]
AT1G11475  NRPB10; RNA polymerases N / 8 kDa subunit [KO:K03007]
AT1G63020  NRPD1A; nuclear RNA polymerase D1A [KO:K16250] [EC:2.7.7.6]
AT2G40030  NRPD1B; nuclear RNA polymerase D1B [KO:K16251] [EC:2.7.7.6]
AT3G23780  NRPD2A; nuclear RNA polymerase D2A [KO:K16252] [EC:2.7.7.6]
AT3G18090  NRPD2B; nuclear RNA polymerase D2B [KO:K16252] [EC:2.7.7.6]
AT3G22900  NRPD7; RNA polymerase Rpb7-like, N-terminal domain-containing protein [KO:K16253]
AT4G14520  DNA-directed RNA polymerase II-like protein [KO:K16253]
AT4G14660  NRPE7; RNA polymerase Rpb7-like, N-terminal domain-containing protein [KO:K16253]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG GENES (52)   
All databases (53)   

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