KEGG   PATHWAY: bja00970
Entry
bja00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Bradyrhizobium diazoefficiens USDA 110
Class
Genetic Information Processing; Translation
Pathway map
bja00970  Aminoacyl-tRNA biosynthesis
bja00970

Organism
Bradyrhizobium diazoefficiens USDA 110 [GN:bja]
Gene
trnA-GGC  trnA-GGC [KO:K14218]
trnA-CGC  trnA-CGC [KO:K14218]
trnA-UGC  trnA-UGC [KO:K14218]
trnR-CCG  trnR-CCG [KO:K14219]
trnR-ACG  trnR-ACG [KO:K14219]
trnR-CCU  trnR-CCU [KO:K14219]
trnR-UCG  trnR-UCG [KO:K14219]
trnR-UCU  trnR-UCU [KO:K14219]
trnN-GUU-1  trnN-GUU [KO:K14220]
trnD-GUC  trnD-GUC [KO:K14221]
trnC-GCA  trnC-GCA [KO:K14222]
trnQ-UUG  trnQ-UUG [KO:K14223]
trnQ-CUG  trnQ-CUG [KO:K14223]
trnE-CUC  trnE-CUC [KO:K14224]
trnE-UUC  trnE-UUC [KO:K14224]
trnG-UCC  trnG-UCC [KO:K14225]
trnG-CCC  trnG-CCC [KO:K14225]
trnG-GCC  trnG-GCC [KO:K14225]
trnH-GUG  trnH-GUG [KO:K14226]
trnI-GAU  trnI-GAU [KO:K14227]
trnL-UAA  trnL-UAA [KO:K14228]
trnL-UAG  trnL-UAG [KO:K14228]
trnL-CAG  trnL-CAG [KO:K14228]
trnL-GAG  trnL-GAG [KO:K14228]
trnL-CAA  trnL-CAA [KO:K14228]
trnK-CUU  trnK-CUU [KO:K14229]
trnK-UUU  trnK-UUU [KO:K14229]
trnI-CAU-1  trnI-CAU [KO:K14230]
trnI-CAU-2  trnI-CAU [KO:K14230]
trnI-CAU-3  trnI-CAU [KO:K14230]
trnM-CAU  trnM-CAU [KO:K14230]
trnfM-CAU  trnfM-CAU [KO:K14230]
trnF-GAA-1  trnF-GAA [KO:K14231]
trnP-UGG  trnP-UGG [KO:K14232]
trnP-GGG  trnP-GGG [KO:K14232]
trnS-GCU  trnS-GCU [KO:K14233]
trnS-GGA  trnS-GGA [KO:K14233]
trnS-CGA  trnS-CGA [KO:K14233]
trnS-UGA  trnS-UGA [KO:K14233]
trnT-CGU  trnT-CGU [KO:K14234]
trnT-UGU  trnT-UGU [KO:K14234]
trnT-GGU  trnT-GGU [KO:K14234]
trnW-CCA  trnW-CCA [KO:K14235]
trnY-GUA  trnY-GUA [KO:K14236]
trnV-GAC  trnV-GAC [KO:K14237]
trnV-UAC  trnV-UAC [KO:K14237]
trnV-CAC  trnV-CAC [KO:K14237]
blr4838  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
bll7917  bll7917; ORF_ID:bll7917; putative glutamyl-tRNA(Gln) amidotransferase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
blr2960  blr2960; glutamyl-tRNA(Gln) amidotransferase subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
blr5603  gatA; glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
blr3229  blr3229; ORF_ID:blr3229; putative glutamyl-tRNA(Gln) amidotransferase subunit (EC 6.3.5.-) [KO:K02433] [EC:6.3.5.6 6.3.5.7]
bll5089  gatA; glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
bll3281  bll3281; ORF_ID:bll3281; putative glutamyl-tRNA(Gln) amidotransferase subunit (EC 6.3.5.-) [KO:K02433] [EC:6.3.5.6 6.3.5.7]
bll5087  gatB; glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
bsl5090  gatC; glutamyl-tRNA-Gln-amidotransferase chain C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
bll4837  glnS; glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
bll5750  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
blr4143  blr4143; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
blr2535  glyQ; glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
blr2536  glyS; glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
blr5537  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
bll4748  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
blr3790  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
bll4516  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
bll8108  fmt; methionyl-tRNA formyl transferase [KO:K00604] [EC:2.1.2.9]
blr4676  blr4676; ORF_ID:blr4676; hypothetical protein [KO:K00604] [EC:2.1.2.9]
blr4475  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
blr0627  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
blr7481  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
blr1133  lysS; lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
bll4757  bll4757; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
bll4877  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
bll7457  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
bll0706  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
bll0705  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
bll4330  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
bll0802  trpS; tryptophan-tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
bja00250  Alanine, aspartate and glutamate metabolism
bja00260  Glycine, serine and threonine metabolism
bja00270  Cysteine and methionine metabolism
bja00290  Valine, leucine and isoleucine biosynthesis
bja00300  Lysine biosynthesis
bja00330  Arginine and proline metabolism
bja00340  Histidine metabolism
bja00380  Tryptophan metabolism
bja00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG GENES (78)   
All databases (79)   

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