KEGG   PATHWAY: cba00970
Entry
cba00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Clostridium botulinum A ATCC 19397
Class
Genetic Information Processing; Translation
Pathway map
cba00970  Aminoacyl-tRNA biosynthesis
cba00970

Organism
Clostridium botulinum A ATCC 19397 [GN:cba]
Gene
CLB_0013  [KO:K14230]
CLB_0014  [KO:K14218]
CLB_0022  serS-1; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
CLB_0023  [KO:K14233]
CLB_0024  [KO:K14233]
CLB_0025  [KO:K14233]
CLB_0026  [KO:K14233]
CLB_0027  [KO:K14219]
CLB_0037  [KO:K14219]
CLB_0041  [KO:K14233]
CLB_0060  [KO:K14229]
CLB_0067  [KO:K14229]
CLB_0075  [KO:K14231]
CLB_0083  [KO:K14222]
CLB_0111  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
CLB_0135  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
CLB_0203  [KO:K14234]
CLB_0204  [KO:K14236]
CLB_0205  [KO:K14237]
CLB_0206  [KO:K14234]
CLB_0207  [KO:K14236]
CLB_0226  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
CLB_0228  [KO:K14223]
CLB_0441  [KO:K14218]
CLB_0442  [KO:K14227]
CLB_0447  [KO:K14220]
CLB_0519  [KO:K14224]
CLB_0551  serS-2; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
CLB_0637  asnS; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
CLB_1059  aspS-1; aspartyl-tRNA synthetase [KO:K09759] [EC:6.1.1.23]
CLB_1112  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
CLB_1134  gltX; glutamyl-tRNA synthetase [KO:K09698] [EC:6.1.1.24]
CLB_1234  tyrS-1; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
CLB_2382  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CLB_2505  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
CLB_2999  [KO:K14238]
CLB_3001  selA; L-seryl-tRNA selenium transferase [KO:K01042] [EC:2.9.1.1]
CLB_3036  [KO:K14228]
CLB_3074  [KO:K14228]
CLB_3083  aspS-2; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
CLB_3084  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
CLB_3160  pheT; phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
CLB_3161  pheS; phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
CLB_3168  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
CLB_3173  [KO:K14222]
CLB_3174  [KO:K14225]
CLB_3175  [KO:K14231]
CLB_3176  [KO:K14221]
CLB_3177  [KO:K14237]
CLB_3199  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
CLB_3295  [KO:K14219]
CLB_3296  [KO:K14225]
CLB_3297  [KO:K14232]
CLB_3298  [KO:K14229]
CLB_3299  [KO:K14219]
CLB_3300  [KO:K14225]
CLB_3301  [KO:K14225]
CLB_3302  [KO:K14228]
CLB_3303  [KO:K14229]
CLB_3304  [KO:K14223]
CLB_3305  [KO:K14226]
CLB_3306  [KO:K14229]
CLB_3307  [KO:K14219]
CLB_3308  [KO:K14225]
CLB_3309  [KO:K14225]
CLB_3310  [KO:K14228]
CLB_3311  [KO:K14229]
CLB_3312  [KO:K14223]
CLB_3313  [KO:K14226]
CLB_3314  [KO:K14219]
CLB_3315  [KO:K14225]
CLB_3316  [KO:K14232]
CLB_3322  gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CLB_3323  gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CLB_3324  gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CLB_3373  [KO:K14235]
CLB_3381  tyrS-2; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
CLB_3389  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
CLB_3402  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
CLB_3554  [KO:K14234]
CLB_3555  [KO:K14225]
CLB_3561  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
CLB_3563  [KO:K01881] [EC:6.1.1.15]
CLB_3575  [KO:K14220]
CLB_3576  [KO:K14220]
CLB_3581  [KO:K14227]
CLB_3583  [KO:K14218]
CLB_3592  glyS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
CLB_3593  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
CLB_3603  [KO:K14230]
CLB_3604  [KO:K14230]
CLB_3605  [KO:K14230]
CLB_3606  [KO:K14228]
CLB_3607  [KO:K14230]
CLB_3608  [KO:K14230]
CLB_3609  [KO:K14228]
CLB_3631  [KO:K14232]
CLB_3697  [KO:K14237]
CLB_3702  [KO:K14237]
CLB_3703  [KO:K14224]
CLB_3784  [KO:K14230]
CLB_3785  [KO:K14230]
CLB_3786  [KO:K14234]
CLB_3787  [KO:K14221]
CLB_3788  [KO:K14237]
CLB_3789  [KO:K14224]
CLB_3790  [KO:K14221]
CLB_3791  [KO:K14224]
CLB_3792  [KO:K14234]
CLB_3793  [KO:K14221]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cba00250  Alanine, aspartate and glutamate metabolism
cba00260  Glycine, serine and threonine metabolism
cba00270  Cysteine and methionine metabolism
cba00290  Valine, leucine and isoleucine biosynthesis
cba00300  Lysine biosynthesis
cba00330  Arginine and proline metabolism
cba00340  Histidine metabolism
cba00380  Tryptophan metabolism
cba00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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