KEGG   PATHWAY: cla00970
Entry
cla00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Campylobacter lari RM2100
Class
Genetic Information Processing; Translation
Pathway map
cla00970  Aminoacyl-tRNA biosynthesis
cla00970

Organism
Campylobacter lari RM2100 [GN:cla]
Gene
CLA_0461  tRNA-Ala [KO:K14218]
CLA_0518  tRNA-Ala [KO:K14218]
CLA_1463  tRNA-Ala [KO:K14218]
CLA_0057  tRNA-Ala [KO:K14218]
CLA_1466  tRNA-Arg [KO:K14219]
CLA_1467  tRNA-Arg [KO:K14219]
CLA_0586  tRNA-Arg [KO:K14219]
CLA_0596  tRNA-Arg [KO:K14219]
CLA_0531  tRNA-Asn [KO:K14220]
CLA_0511  tRNA-Asp [KO:K14221]
CLA_0514  tRNA-Asp [KO:K14221]
CLA_1542  tRNA-Cys [KO:K14222]
CLA_0605  tRNA-Gln [KO:K14223]
CLA_0046  tRNA-Glu [KO:K14224]
CLA_1489  tRNA-Glu [KO:K14224]
CLA_0516  tRNA-Glu [KO:K14224]
CLA_0739  tRNA-Gly [KO:K14225]
CLA_1544  tRNA-Gly [KO:K14225]
CLA_0438  tRNA-Gly [KO:K14225]
CLA_1468  tRNA-His [KO:K14226]
CLA_0462  tRNA-Ile [KO:K14227]
CLA_1462  tRNA-Ile [KO:K14227]
CLA_0519  tRNA-Ile [KO:K14227]
CLA_0823  tRNA-Leu [KO:K14228]
CLA_1202  tRNA-Leu [KO:K14228]
CLA_1465  tRNA-Leu [KO:K14228]
CLA_1543  tRNA-Leu [KO:K14228]
CLA_0509  tRNA-Lys [KO:K14229]
CLA_0515  tRNA-Lys [KO:K14229]
CLA_0512  tRNA-Lys [KO:K14229]
CLA_0606  tRNA-Met [KO:K14230]
CLA_0607  tRNA-Met [KO:K14230]
CLA_0136  tRNA-Met [KO:K14230]
CLA_0289  tRNA-Phe [KO:K14231]
CLA_1469  tRNA-Pro [KO:K14232]
CLA_1265  tRNA-Ser [KO:K14233]
CLA_1541  tRNA-Ser [KO:K14233]
CLA_0134  tRNA-Ser [KO:K14233]
CLA_0436  tRNA-Thr [KO:K14234]
CLA_0439  tRNA-Thr [KO:K14234]
CLA_0442  tRNA-Trp [KO:K14235]
CLA_0437  tRNA-Tyr [KO:K14236]
CLA_1569  tRNA-Val [KO:K14237]
CLA_0510  tRNA-Val [KO:K14237]
CLA_0513  tRNA-Val [KO:K14237]
CLA_0367  selC; tRNA-Sec [KO:K14238]
CLA_1293  gltX2; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
CLA_0717  gltX1; glutamyl-tRNA synthetase [KO:K09698] [EC:6.1.1.24]
CLA_1160  gatA; Glu-tRNA(Gln) amidotransferase, subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CLA_1207  gatB; Glu-tRNA(Gln) amidotransferase, subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CLA_0485  gatC; Glu-tRNA(Gln) amidotransferase, subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CLA_1072  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
CLA_0649  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
CLA_1002  glyQ; glycyl-tRNA synthetase, alpha chain [KO:K01878] [EC:6.1.1.14]
CLA_0601  glyS; glycyl-tRNA synthetase, beta chain [KO:K01879] [EC:6.1.1.14]
CLA_0028  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
CLA_0533  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
CLA_1286  selA; selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
CLA_0630  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
CLA_0724  metS; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
CLA_0186  fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase [KO:K00604] [EC:2.1.2.9]
CLA_1233  formyltransferase domain-containing protein [KO:K00604] [EC:2.1.2.9]
CLA_1236  formyltransferase domain-containing protein [KO:K00604] [EC:2.1.2.9]
CLA_1322  formyltransferase domain-containing protein [KO:K00604] [EC:2.1.2.9]
CLA_1311  formyltransferase domain-containing protein [KO:K00604] [EC:2.1.2.9]
CLA_0645  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
CLA_1045  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
CLA_1161  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
CLA_0488  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
CLA_1087  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
CLA_0769  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
CLA_0745  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
CLA_1194  pheS; phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
CLA_1193  pheT; phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
CLA_0618  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
CLA_0534  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cla00250  Alanine, aspartate and glutamate metabolism
cla00260  Glycine, serine and threonine metabolism
cla00270  Cysteine and methionine metabolism
cla00290  Valine, leucine and isoleucine biosynthesis
cla00300  Lysine biosynthesis
cla00330  Arginine and proline metabolism
cla00340  Histidine metabolism
cla00380  Tryptophan metabolism
cla00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG GENES (76)   
All databases (77)   

Download RDF
DBGET integrated database retrieval system