KEGG   PATHWAY: dvm00970
Entry
dvm00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Nitratidesulfovibrio vulgaris Miyazaki F
Class
Genetic Information Processing; Translation
Pathway map
dvm00970  Aminoacyl-tRNA biosynthesis
dvm00970

Organism
Nitratidesulfovibrio vulgaris Miyazaki F [GN:dvm]
Gene
DvMF_R0053  tRNA-Ala [KO:K14218]
DvMF_R0055  tRNA-Ala [KO:K14218]
DvMF_R0032  tRNA-Ala [KO:K14218]
DvMF_R0064  tRNA-Ala [KO:K14218]
DvMF_R0058  tRNA-Ala [KO:K14218]
DvMF_R0025  tRNA-Ala [KO:K14218]
DvMF_R0080  tRNA-Ala [KO:K14218]
DvMF_R0037  tRNA-Arg [KO:K14219]
DvMF_R0054  tRNA-Arg [KO:K14219]
DvMF_R0016  tRNA-Arg [KO:K14219]
DvMF_R0010  tRNA-Arg [KO:K14219]
DvMF_R0011  tRNA-Arg [KO:K14219]
DvMF_R0012  tRNA-Arg [KO:K14219]
DvMF_R0076  tRNA-Asn [KO:K14220]
DvMF_R0077  tRNA-Asn [KO:K14220]
DvMF_R0046  tRNA-Asp [KO:K14221]
DvMF_R0045  tRNA-Asp [KO:K14221]
DvMF_R0004  tRNA-Cys [KO:K14222]
DvMF_R0043  tRNA-Gln [KO:K14223]
DvMF_R0020  tRNA-Gln [KO:K14223]
DvMF_R0070  tRNA-Glu [KO:K14224]
DvMF_R0071  tRNA-Glu [KO:K14224]
DvMF_R0044  tRNA-Glu [KO:K14224]
DvMF_R0001  tRNA-Gly [KO:K14225]
DvMF_R0005  tRNA-Gly [KO:K14225]
DvMF_R0003  tRNA-Gly [KO:K14225]
DvMF_R0002  tRNA-Gly [KO:K14225]
DvMF_R0040  tRNA-Gly [KO:K14225]
DvMF_R0069  tRNA-His [KO:K14226]
DvMF_R0026  tRNA-Ile [KO:K14227]
DvMF_R0063  tRNA-Ile [KO:K14227]
DvMF_R0057  tRNA-Ile [KO:K14227]
DvMF_R0033  tRNA-Ile [KO:K14227]
DvMF_R0017  tRNA-Leu [KO:K14228]
DvMF_R0035  tRNA-Leu [KO:K14228]
DvMF_R0079  tRNA-Leu [KO:K14228]
DvMF_R0052  tRNA-Leu [KO:K14228]
DvMF_R0049  tRNA-Leu [KO:K14228]
DvMF_R0008  tRNA-Leu [KO:K14228]
DvMF_R0029  tRNA-Leu [KO:K14228]
DvMF_R0078  tRNA-Lys [KO:K14229]
DvMF_R0061  tRNA-Lys [KO:K14229]
DvMF_R0018  tRNA-Met [KO:K14230]
DvMF_R0021  tRNA-Met [KO:K14230]
DvMF_R0067  tRNA-Met [KO:K14230]
DvMF_R0015  tRNA-Met [KO:K14230]
DvMF_R0068  tRNA-Phe [KO:K14231]
DvMF_R0013  tRNA-Pro [KO:K14232]
DvMF_R0022  tRNA-Pro [KO:K14232]
DvMF_R0050  tRNA-Pro [KO:K14232]
DvMF_R0075  tRNA-Ser [KO:K14233]
DvMF_R0009  tRNA-Ser [KO:K14233]
DvMF_R0072  tRNA-Ser [KO:K14233]
DvMF_R0073  tRNA-Ser [KO:K14233]
DvMF_R0051  tRNA-Thr [KO:K14234]
DvMF_R0006  tRNA-Thr [KO:K14234]
DvMF_R0038  tRNA-Thr [KO:K14234]
DvMF_R0041  tRNA-Thr [KO:K14234]
DvMF_R0042  tRNA-Trp [KO:K14235]
DvMF_R0039  tRNA-Tyr [KO:K14236]
DvMF_R0028  tRNA-Val [KO:K14237]
DvMF_R0047  tRNA-Val [KO:K14237]
DvMF_R0048  tRNA-Val [KO:K14237]
DvMF_R0007  tRNA-Sec [KO:K14238]
DvMF_0334  Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
DvMF_0996  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
DvMF_2838  glutamyl-tRNA(Gln) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DvMF_0578  glutamyl-tRNA(Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DvMF_2837  glutamyl-tRNA(Gln) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DvMF_1485  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
DvMF_0877  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
DvMF_2038  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
DvMF_2087  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
DvMF_0290  glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
DvMF_0291  glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
DvMF_0984  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
DvMF_2224  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
DvMF_1311  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
DvMF_0482  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
DvMF_0759  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
DvMF_2040  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DvMF_2765  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
DvMF_3090  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
DvMF_0266  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
DvMF_2993  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
DvMF_0850  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
DvMF_0121  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
DvMF_2037  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
DvMF_0980  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
DvMF_0979  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
DvMF_1356  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DvMF_2336  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
dvm00250  Alanine, aspartate and glutamate metabolism
dvm00260  Glycine, serine and threonine metabolism
dvm00270  Cysteine and methionine metabolism
dvm00290  Valine, leucine and isoleucine biosynthesis
dvm00300  Lysine biosynthesis
dvm00330  Arginine and proline metabolism
dvm00340  Histidine metabolism
dvm00380  Tryptophan metabolism
dvm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG GENES (92)   
All databases (93)   

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