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Entry
ell00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Escherichia coli W
Class
Genetic Information Processing; Translation
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Pathway map
Aminoacyl-tRNA biosynthesis
ell00970

All organismsOrtholog table
Module
Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:ell00970]
Organism
Escherichia coli W [GN:ell]
Gene
alaX; tRNA-Ala [KO:K14218]
alaW; tRNA-Ala [KO:K14218]
alaV; tRNA-Ala [KO:K14218]
alaT; tRNA-Ala [KO:K14218]
alaU; tRNA-Ala [KO:K14218]
argU; tRNA-Arg [KO:K14219]
argX; tRNA-Arg [KO:K14219]
argQ; tRNA-Arg [KO:K14219]
argV; tRNA-Arg [KO:K14219]
argZ; tRNA-Arg [KO:K14219]
argY; tRNA-Arg [KO:K14219]
argW; tRNA-Arg [KO:K14219]
asnT; tRNA-Asn [KO:K14220]
asnV; tRNA-Asn [KO:K14220]
asnW; tRNA-Asn [KO:K14220]
asnU; tRNA-Asn [KO:K14220]
aspU; tRNA-Asp [KO:K14221]
aspT; tRNA-Asp [KO:K14221]
aspV; tRNA-Asp [KO:K14221]
cysT; tRNA-Cys [KO:K14222]
glnX; tRNA-Gln [KO:K14223]
glnV; tRNA-Gln [KO:K14223]
glnW; tRNA-Gln [KO:K14223]
glnU; tRNA-Gln [KO:K14223]
gltW; tRNA-Glu [KO:K14224]
gltT; tRNA-Glu [KO:K14224]
gltU; tRNA-Glu [KO:K14224]
gltV; tRNA-Glu [KO:K14224]
glyT; tRNA-Gly [KO:K14225]
glyZ; tRNA-Gly [KO:K14225]
glyU; tRNA-Gly [KO:K14225]
glyW; tRNA-Gly [KO:K14225]
glyX; tRNA-Gly [KO:K14225]
glyV; tRNA-Gly [KO:K14225]
glyY; tRNA-Gly [KO:K14225]
hisR; tRNA-His [KO:K14226]
ileV; tRNA-Ile [KO:K14227]
ileU; tRNA-Ile [KO:K14227]
ileT; tRNA-Ile [KO:K14227]
leuZ; tRNA-Leu [KO:K14228]
leuW; tRNA-Leu [KO:K14228]
leuT; tRNA-Leu [KO:K14228]
leuQ; tRNA-Leu [KO:K14228]
leuV; tRNA-Leu [KO:K14228]
leuP; tRNA-Leu [KO:K14228]
leuU; tRNA-Leu [KO:K14228]
leuX; tRNA-Leu [KO:K14228]
lysT; tRNA-Lys [KO:K14229]
lysV; tRNA-Lys [KO:K14229]
lysW; tRNA-Lys [KO:K14229]
lysZ; tRNA-Lys [KO:K14229]
lysQ; tRNA-Lys [KO:K14229]
lysY; tRNA-Lys [KO:K14229]
metZ; tRNA-Met [KO:K14230]
metY; tRNA-Met [KO:K14230]
metV; tRNA-Met [KO:K14230]
metW; tRNA-Met [KO:K14230]
metU; tRNA-Met [KO:K14230]
metT; tRNA-Met [KO:K14230]
ileX; tRNA-Ile [KO:K14230]
pheV; tRNA-Phe [KO:K14231]
pheU; tRNA-Phe [KO:K14231]
proK; tRNA-Pro [KO:K14232]
proM; tRNA-Pro [KO:K14232]
proL; tRNA-Pro [KO:K14232]
serW; tRNA-Ser [KO:K14233]
serX; tRNA-Ser [KO:K14233]
serV; tRNA-Ser [KO:K14233]
serU; tRNA-Ser [KO:K14233]
serT; tRNA-Ser [KO:K14233]
thrT; tRNA-Thr [KO:K14234]
thrX; tRNA-Thr [KO:K14234]
thrU; tRNA-Thr [KO:K14234]
thrV; tRNA-Thr [KO:K14234]
thrW; tRNA-Thr [KO:K14234]
trpT; tRNA-Trp [KO:K14235]
tyrU; tRNA-Tyr [KO:K14236]
tyrV; tRNA-Tyr [KO:K14236]
tyrT; tRNA-Tyr [KO:K14236]
valT; tRNA-Val [KO:K14237]
valZ; tRNA-Val [KO:K14237]
valY; tRNA-Val [KO:K14237]
valX; tRNA-Val [KO:K14237]
valU; tRNA-Val [KO:K14237]
valW; tRNA-Val [KO:K14237]
valV; tRNA-Val [KO:K14237]
selC; tRNA-Sec [KO:K14238]
gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
glnS; glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
asnS; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
selA; selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
lysU; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
yjeA; EF-P-lysine aminoacylase [KO:K04568] [EC:6.1.1.6]
argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  
L-Glutamate
C00037  
Glycine
C00041  
L-Alanine
C00047  
L-Lysine
C00049  
L-Aspartate
C00062  
L-Arginine
C00064  
L-Glutamine
C00065  
L-Serine
C00073  
L-Methionine
C00078  
L-Tryptophan
C00079  
L-Phenylalanine
C00082  
L-Tyrosine
C00097  
L-Cysteine
C00101  
Tetrahydrofolate
C00123  
L-Leucine
C00135  
L-Histidine
C00148  
L-Proline
C00152  
L-Asparagine
C00183  
L-Valine
C00188  
L-Threonine
C00234  
10-Formyltetrahydrofolate
C00407  
L-Isoleucine
C00886  
L-Alanyl-tRNA
C01005  
O-Phospho-L-serine
C01931  
L-Lysyl-tRNA
C02047  
L-Leucyl-tRNA
C02163  
L-Arginyl-tRNA(Arg)
C02282  
Glutaminyl-tRNA
C02412  
Glycyl-tRNA(Gly)
C02430  
L-Methionyl-tRNA
C02553  
L-Seryl-tRNA(Ser)
C02554  
L-Valyl-tRNA(Val)
C02702  
L-Prolyl-tRNA(Pro)
C02839  
L-Tyrosyl-tRNA(Tyr)
C02984  
L-Aspartyl-tRNA(Asp)
C02987  
L-Glutamyl-tRNA(Glu)
C02988  
L-Histidyl-tRNA(His)
C02992  
L-Threonyl-tRNA(Thr)
C03125  
L-Cysteinyl-tRNA(Cys)
C03127  
L-Isoleucyl-tRNA(Ile)
C03294  
N-Formylmethionyl-tRNA
C03402  
L-Asparaginyl-tRNA(Asn)
C03511  
L-Phenylalanyl-tRNA(Phe)
C03512  
L-Tryptophanyl-tRNA(Trp)
C06112  
L-Glutamyl-tRNA(Gln)
C06113  
L-Aspartyl-tRNA(Asn)
C06481  
L-Seryl-tRNA(Sec)
C06482  
L-Selenocysteinyl-tRNA(Sec)
C16138  
L-Pyrrolysine
C16638  
O-Phosphoseryl-tRNA(Sec)
C17022  
O-Phosphoseryl-tRNA(Cys)
C17027  
L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
KO pathway
 
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