KEGG   PATHWAY: ell00970
Entry
ell00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Escherichia coli W
Class
Genetic Information Processing; Translation
Pathway map
ell00970  Aminoacyl-tRNA biosynthesis
ell00970

Organism
Escherichia coli W [GN:ell]
Gene
WFL_00130  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
WFL_00945  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
WFL_02960  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
WFL_03460  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
WFL_03600  glnS; glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
WFL_04875  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
WFL_05065  asnS; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
WFL_08840  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
WFL_09220  pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
WFL_09225  pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
WFL_09245  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
WFL_10020  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
WFL_10070  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
WFL_11330  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
WFL_12900  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
WFL_13415  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
WFL_14125  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
WFL_15350  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
WFL_17360  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
WFL_17775  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
WFL_18710  glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
WFL_18715  glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
WFL_18885  selA; selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
WFL_21845  lysU; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
WFL_22490  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
WFL_t23212  ileV; tRNA-Ile [KO:K14227]
WFL_t23214  alaV; tRNA-Ala [KO:K14218]
WFL_t23216  aspU; tRNA-Asp [KO:K14221]
WFL_t23218  aspV; tRNA-Asp [KO:K14221]
WFL_t23220  thrW; tRNA-Thr [KO:K14234]
WFL_t23224  argU; tRNA-Arg [KO:K14219]
WFL_t23226  glnX; tRNA-Gln [KO:K14223]
WFL_t23228  glnV; tRNA-Gln [KO:K14223]
WFL_t23230  metU; tRNA-Met [KO:K14230]
WFL_t23232  glnW; tRNA-Gln [KO:K14223]
WFL_t23234  glnU; tRNA-Gln [KO:K14223]
WFL_t23236  leuW; tRNA-Leu [KO:K14228]
WFL_t23238  metT; tRNA-Met [KO:K14230]
WFL_t23240  lysT; tRNA-Lys [KO:K14229]
WFL_t23242  valT; tRNA-Val [KO:K14237]
WFL_t23244  lysW; tRNA-Lys [KO:K14229]
WFL_t23246  valZ; tRNA-Val [KO:K14237]
WFL_t23248  lysY; tRNA-Lys [KO:K14229]
WFL_t23250  lysZ; tRNA-Lys [KO:K14229]
WFL_t23252  lysQ; tRNA-Lys [KO:K14229]
WFL_t23254  serW; tRNA-Ser [KO:K14233]
WFL_t23256  serT; tRNA-Ser [KO:K14233]
WFL_t23258  serX; tRNA-Ser [KO:K14233]
WFL_t23260  tyrV; tRNA-Tyr [KO:K14236]
WFL_t23262  tyrT; tRNA-Tyr [KO:K14236]
WFL_t23264  thrX; tRNA-Thr [KO:K14234]
WFL_t23266  glyZ; tRNA-Gly [KO:K14225]
WFL_t23268  valV; tRNA-Val [KO:K14237]
WFL_t23270  valW; tRNA-Val [KO:K14237]
WFL_t23272  leuZ; tRNA-Leu [KO:K14228]
WFL_t23274  cysT; tRNA-Cys [KO:K14222]
WFL_t23276  glyW; tRNA-Gly [KO:K14225]
WFL_t23278  serU; tRNA-Ser [KO:K14233]
WFL_t23280  asnT; tRNA-Asn [KO:K14220]
WFL_t23282  asnW; tRNA-Asn [KO:K14220]
WFL_t23284  asnU; tRNA-Asn [KO:K14220]
WFL_t23286  asnV; tRNA-Asn [KO:K14220]
WFL_t23288  proL; tRNA-Pro [KO:K14232]
WFL_t23290  argW; tRNA-Arg [KO:K14219]
WFL_t23292  alaX; tRNA-Ala [KO:K14218]
WFL_t23294  alaW; tRNA-Ala [KO:K14218]
WFL_t23296  valU; tRNA-Val [KO:K14237]
WFL_t23298  valX; tRNA-Val [KO:K14237]
WFL_t23300  valY; tRNA-Val [KO:K14237]
WFL_t23302  lysV; tRNA-Lys [KO:K14229]
WFL_t23304  gltW; tRNA-Glu [KO:K14224]
WFL_t23306  argQ; tRNA-Arg [KO:K14219]
WFL_t23308  argZ; tRNA-Arg [KO:K14219]
WFL_t23310  argY; tRNA-Arg [KO:K14219]
WFL_t23312  argV; tRNA-Arg [KO:K14219]
WFL_t23314  serV; tRNA-Ser [KO:K14233]
WFL_t23316  metZ; tRNA-Met [KO:K14230]
WFL_t23318  metW; tRNA-Met [KO:K14230]
WFL_t23320  metV; tRNA-Met [KO:K14230]
WFL_t23322  glyU; tRNA-Gly [KO:K14225]
WFL_t23324  pheV; tRNA-Phe [KO:K14231]
WFL_t23326  ileX; tRNA-Ile [KO:K14230]
WFL_t23328  metY; tRNA-Met [KO:K14230]
WFL_t23330  leuU; tRNA-Leu [KO:K14228]
WFL_t23332  thrV; tRNA-Thr [KO:K14234]
WFL_t23334  alaU; tRNA-Ala [KO:K14218]
WFL_t23336  ileU; tRNA-Ile [KO:K14227]
WFL_t23338  proK; tRNA-Pro [KO:K14232]
WFL_t23340  selC; tRNA-Sec [KO:K14238]
WFL_t23342  gltU; tRNA-Glu [KO:K14224]
WFL_t23344  aspT; tRNA-Asp [KO:K14221]
WFL_t23346  trpT; tRNA-Trp [KO:K14235]
WFL_t23348  argX; tRNA-Arg [KO:K14219]
WFL_t23350  hisR; tRNA-His [KO:K14226]
WFL_t23352  leuT; tRNA-Leu [KO:K14228]
WFL_t23354  proM; tRNA-Pro [KO:K14232]
WFL_t23356  ileT; tRNA-Ile [KO:K14227]
WFL_t23358  alaT; tRNA-Ala [KO:K14218]
WFL_t23360  gltT; tRNA-Glu [KO:K14224]
WFL_t23362  thrU; tRNA-Thr [KO:K14234]
WFL_t23364  tyrU; tRNA-Tyr [KO:K14236]
WFL_t23366  glyT; tRNA-Gly [KO:K14225]
WFL_t23368  thrT; tRNA-Thr [KO:K14234]
WFL_t23370  gltV; tRNA-Glu [KO:K14224]
WFL_t23372  pheU; tRNA-Phe [KO:K14231]
WFL_t23374  glyV; tRNA-Gly [KO:K14225]
WFL_t23376  glyX; tRNA-Gly [KO:K14225]
WFL_t23378  glyY; tRNA-Gly [KO:K14225]
WFL_t23380  leuX; tRNA-Leu [KO:K14228]
WFL_t23382  leuV; tRNA-Leu [KO:K14228]
WFL_t23384  leuP; tRNA-Leu [KO:K14228]
WFL_t23386  leuQ; tRNA-Leu [KO:K14228]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ell00250  Alanine, aspartate and glutamate metabolism
ell00260  Glycine, serine and threonine metabolism
ell00270  Cysteine and methionine metabolism
ell00290  Valine, leucine and isoleucine biosynthesis
ell00300  Lysine biosynthesis
ell00330  Arginine and proline metabolism
ell00340  Histidine metabolism
ell00380  Tryptophan metabolism
ell00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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