KEGG   PATHWAY: kdi00230
Entry
kdi00230                    Pathway                                
Name
Purine metabolism - Dokdonia sp. 4H-3-7-5
Class
Metabolism; Nucleotide metabolism
Pathway map
kdi00230  Purine metabolism
kdi00230

Module
kdi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:kdi00230]
kdi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:kdi00230]
kdi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:kdi00230]
kdi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:kdi00230]
kdi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:kdi00230]
Other DBs
GO: 0006163 0042278
Organism
Dokdonia sp. 4H-3-7-5 [GN:kdi]
Gene
Krodi_0050  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K01835] [EC:5.4.2.2]
Krodi_0998  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Krodi_1107  Amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Krodi_1201  phosphoribosylamine/glycine ligase [KO:K01945] [EC:6.3.4.13]
Krodi_1104  formyl transferase domain protein [KO:K11175] [EC:2.1.2.2]
Krodi_1867  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
Krodi_2731  Phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Krodi_0141  Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Krodi_0551  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Krodi_0552  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Krodi_0352  Phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Krodi_2489  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Krodi_1654  Phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Krodi_2415  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Krodi_0429  metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
Krodi_0604  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Krodi_0636  inosine guanosine and xanthosine phosphorylase family [KO:K03783] [EC:2.4.2.1]
Krodi_2956  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Krodi_2102  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Krodi_2592  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Krodi_0036  GMP synthase, large subunit [KO:K01951] [EC:6.3.5.2]
Krodi_2663  CMP/dCMP deaminase zinc-binding protein [KO:K01487] [EC:3.5.4.3]
Krodi_1246  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Krodi_1498  ribonucleoside-diphosphate reductase, alpha chain [KO:K00525] [EC:1.17.4.1]
Krodi_1497  ATP-cone domain protein [KO:K00526] [EC:1.17.4.1]
Krodi_1521  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Krodi_0152  (p)ppGpp synthetase I, SpoT/RelA [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Krodi_2855  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Krodi_0174  adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
Krodi_1419  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Krodi_0154  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Krodi_0765  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
Krodi_1631  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
Krodi_0550  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Krodi_2253  hypothetical protein [KO:K00939] [EC:2.7.4.3]
Krodi_0287  Phosphodiesterase I [KO:K18424] [EC:3.6.1.29]
Krodi_0743  sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
Krodi_0744  sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
kdi00030  Pentose phosphate pathway
kdi00220  Arginine biosynthesis
kdi00250  Alanine, aspartate and glutamate metabolism
kdi00260  Glycine, serine and threonine metabolism
kdi00340  Histidine metabolism
kdi00630  Glyoxylate and dicarboxylate metabolism
kdi00730  Thiamine metabolism
kdi00740  Riboflavin metabolism
kdi00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG GENES (38)   
All databases (39)   

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