KEGG   PATHWAY: mmar00630Help
Entry
mmar00630                   Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Modestobacter marinus
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
mmar00630  Glyoxylate and dicarboxylate metabolism
mmar00630

Ortholog table
Module
mmar_M00012  Glyoxylate cycle [PATH:mmar00630]
mmar_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mmar00630]
Organism
Modestobacter marinus [GN:mmar]
Gene
MODMU_2863  aceA; Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MODMU_5170  aceB; Malate synthase [KO:K01638] [EC:2.3.3.9]
MODMU_2864  aceB; Malate synthase [KO:K01638] [EC:2.3.3.9]
MODMU_4825  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
MODMU_3385  citA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
MODMU_0879  citA; citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
MODMU_1051  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
MODMU_3591  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
MODMU_4009  phbA; acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
MODMU_0323  fadI; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MODMU_4520  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MODMU_0982  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MODMU_2457  phbB; Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
MODMU_4521  mce; Methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
MODMU_4765  putative propionyl-CoA carboxylase beta chain [KO:K01966] [EC:2.1.3.15 6.4.1.3]
MODMU_1451  Acetyl/propionyl-CoA carboxylase, alpha subunit [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
MODMU_4770  bccA; Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Biotin carboxylase; Biotin carboxyl carrier protein] [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
MODMU_1841  pccB; Propionyl-CoA carboxylase beta chain [KO:K18472] [EC:2.1.3.15 6.4.1.3 6.4.1.2]
MODMU_4779  mutB; Methylmalonyl-CoA mutase large subunit (MCM-alpha) [KO:K01847] [EC:5.4.99.2]
MODMU_4780  mutA; Methylmalonyl-CoA mutase small subunit (MCM-beta) [KO:K01847] [EC:5.4.99.2]
MODMU_4014  Methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
MODMU_5151  glcD; Glycolate oxidase subunit [KO:K00104] [EC:1.1.3.15]
MODMU_5171  glcD; glycolate oxidase, subunit GlcD [KO:K00104] [EC:1.1.3.15]
MODMU_5172  glcE; glycolate oxidase FAD binding subunit [KO:K11472]
MODMU_5173  glcF; Glycolate oxidase iron-sulfur subunit [KO:K11473]
MODMU_1110  katE; Catalase HPII [KO:K03781] [EC:1.11.1.6]
MODMU_2078  katA; Catalase [KO:K03781] [EC:1.11.1.6]
MODMU_0648  Putative hydrolase [KO:K01091] [EC:3.1.3.18]
MODMU_5164  Serine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
MODMU_3978  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MODMU_1901  glnA; Glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
MODMU_1914  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MODMU_1959  glnA; Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI) [KO:K01915] [EC:6.3.1.2]
MODMU_3071  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_5350  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_4549  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_2666  gcvP; Glycine cleavage system P-protein (glycine dehydrogenase) [KO:K00281] [EC:1.4.4.2]
MODMU_3546  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
MODMU_4773  lpdA; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component [KO:K00382] [EC:1.8.1.4]
MODMU_1468  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MODMU_1659  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MODMU_3549  bfmBC; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MODMU_2671  gcvH; Glycine cleavage system H-protein [KO:K02437]
MODMU_2737  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
MODMU_0063  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
MODMU_4571  gyaR; Glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
MODMU_0406  fdhA1; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
MODMU_0407  fdhA2; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
MODMU_0408  fdhB; Formate dehydrogenase, beta subunit [KO:K00124]
MODMU_1321  fdnI; Formate dehydrogenase gamma subunit [KO:K00127]
MODMU_2853  purU; Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase) [KO:K01433] [EC:3.5.1.10]
MODMU_2883  purU; Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase) [KO:K01433] [EC:3.5.1.10]
MODMU_4059  fmdA; formamidase (formamide amidohydrolase) [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
KO pathway
ko00630   

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