KEGG   PATHWAY: mmar00630
Entry
mmar00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Modestobacter italicus
Class
Metabolism; Carbohydrate metabolism
Pathway map
mmar00630  Glyoxylate and dicarboxylate metabolism
mmar00630

Module
mmar_M00012  Glyoxylate cycle [PATH:mmar00630]
mmar_M00621  Glycine cleavage system [PATH:mmar00630]
mmar_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mmar00630]
Other DBs
GO: 0046487 0043648
Organism
Modestobacter italicus [GN:mmar]
Gene
MODMU_0063  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
MODMU_0323  fadI; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MODMU_0406  fdhA1; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
MODMU_0407  fdhA2; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
MODMU_0408  fdhB; Formate dehydrogenase, beta subunit [KO:K00124]
MODMU_0609  acsA; Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
MODMU_0648  [KO:K01091] [EC:3.1.3.18]
MODMU_0879  citA; citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
MODMU_0889  [KO:K05825] [EC:2.6.1.-]
MODMU_0982  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MODMU_1051  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
MODMU_1110  katE; Catalase HPII [KO:K03781] [EC:1.11.1.6]
MODMU_1321  fdnI; Formate dehydrogenase gamma subunit [KO:K00127]
MODMU_1659  [KO:K00382] [EC:1.8.1.4]
MODMU_1841  pccB; Propionyl-CoA carboxylase beta chain [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
MODMU_1901  glnA; Glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
MODMU_1914  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MODMU_1959  glnA; Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI) [KO:K01915] [EC:6.3.1.2]
MODMU_2078  katA; Catalase [KO:K03781] [EC:1.11.1.6]
MODMU_2457  phbB; Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
MODMU_2666  gcvP; Glycine cleavage system P-protein (glycine dehydrogenase) [KO:K00281] [EC:1.4.4.2]
MODMU_2671  gcvH; Glycine cleavage system H-protein [KO:K02437]
MODMU_2702  [KO:K01895] [EC:6.2.1.1]
MODMU_2737  [KO:K01816] [EC:5.3.1.22]
MODMU_2853  purU; Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase) [KO:K01433] [EC:3.5.1.10]
MODMU_2863  aceA; Isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
MODMU_2864  aceB; Malate synthase [KO:K01638] [EC:2.3.3.9]
MODMU_2883  purU; Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase) [KO:K01433] [EC:3.5.1.10]
MODMU_3071  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_3385  citA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
MODMU_3546  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
MODMU_3549  bfmBC; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MODMU_3591  acnA; aconitate hydratase 1 [KO:K27802]
MODMU_3978  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MODMU_4009  phbA; acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
MODMU_4014  [KO:K04835] [EC:4.3.1.2]
MODMU_4059  fmdA; formamidase (formamide amidohydrolase) [KO:K01455] [EC:3.5.1.49]
MODMU_4520  [KO:K00626] [EC:2.3.1.9]
MODMU_4521  mce; Methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
MODMU_4549  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_4568  sucA; 2-oxoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
MODMU_4765  [KO:K27094]
MODMU_4766  [KO:K27095]
MODMU_4770  bccA; Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Biotin carboxylase; Biotin carboxyl carrier protein] [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
MODMU_4779  mutB; Methylmalonyl-CoA mutase large subunit (MCM-alpha) [KO:K01847] [EC:5.4.99.2]
MODMU_4780  mutA; Methylmalonyl-CoA mutase small subunit (MCM-beta) [KO:K01847] [EC:5.4.99.2]
MODMU_4825  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
MODMU_5151  glcD; Glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
MODMU_5164  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
MODMU_5170  aceB; Malate synthase [KO:K01638] [EC:2.3.3.9]
MODMU_5171  glcD; glycolate oxidase, subunit GlcD [KO:K00104] [EC:1.1.99.14]
MODMU_5172  glcE; glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
MODMU_5173  glcF; Glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
MODMU_5350  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MODMU_5588  [KO:K05825] [EC:2.6.1.-]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mmar00010  Glycolysis / Gluconeogenesis
mmar00020  Citrate cycle (TCA cycle)
mmar00030  Pentose phosphate pathway
mmar00053  Ascorbate and aldarate metabolism
mmar00071  Fatty acid degradation
mmar00230  Purine metabolism
mmar00250  Alanine, aspartate and glutamate metabolism
mmar00260  Glycine, serine and threonine metabolism
mmar00270  Cysteine and methionine metabolism
mmar00620  Pyruvate metabolism
mmar00710  Carbon fixation by Calvin cycle
mmar00750  Vitamin B6 metabolism
mmar00910  Nitrogen metabolism
KO pathway
ko00630   

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