KEGG   PATHWAY: pjd00970Help
Entry
pjd00970                    Pathway                                

Name
Aminoacyl-tRNA biosynthesis - Paenibacillus sp. JDR-2
Class
Genetic Information Processing; Translation
BRITE hierarchy
Pathway map
pjd00970  Aminoacyl-tRNA biosynthesis
pjd00970

Ortholog table
Module
pjd_M00360  Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:pjd00970]
Organism
Paenibacillus sp. JDR-2 [GN:pjd]
Gene
Pjdr2_R0007  tRNA-Ala [KO:K14218]
Pjdr2_R0120  tRNA-Ala [KO:K14218]
Pjdr2_R0125  tRNA-Ala [KO:K14218]
Pjdr2_R0063  tRNA-Ala [KO:K14218]
Pjdr2_R0081  tRNA-Ala [KO:K14218]
Pjdr2_R0102  tRNA-Arg [KO:K14219]
Pjdr2_R0011  tRNA-Arg [KO:K14219]
Pjdr2_R0079  tRNA-Arg [KO:K14219]
Pjdr2_R0058  tRNA-Arg [KO:K14219]
Pjdr2_R0110  tRNA-Arg [KO:K14219]
Pjdr2_R0022  tRNA-Arg [KO:K14219]
Pjdr2_R0027  tRNA-Asn [KO:K14220]
Pjdr2_R0107  tRNA-Asn [KO:K14220]
Pjdr2_R0118  tRNA-Asn [KO:K14220]
Pjdr2_R0065  tRNA-Asn [KO:K14220]
Pjdr2_R0018  tRNA-Asp [KO:K14221]
Pjdr2_R0070  tRNA-Asp [KO:K14221]
Pjdr2_R0032  tRNA-Asp [KO:K14221]
Pjdr2_R0054  tRNA-Asp [KO:K14221]
Pjdr2_R0078  tRNA-Cys [KO:K14222]
Pjdr2_R0046  tRNA-Gln [KO:K14223]
Pjdr2_R0076  tRNA-Gln [KO:K14223]
Pjdr2_R0114  tRNA-Gln [KO:K14223]
Pjdr2_R0029  tRNA-Glu [KO:K14224]
Pjdr2_R0051  tRNA-Glu [KO:K14224]
Pjdr2_R0067  tRNA-Glu [KO:K14224]
Pjdr2_R0105  tRNA-Glu [KO:K14224]
Pjdr2_R0116  tRNA-Glu [KO:K14224]
Pjdr2_R0108  tRNA-Gly [KO:K14225]
Pjdr2_R0039  tRNA-Gly [KO:K14225]
Pjdr2_R0077  tRNA-Gly [KO:K14225]
Pjdr2_R0111  tRNA-Gly [KO:K14225]
Pjdr2_R0057  tRNA-Gly [KO:K14225]
Pjdr2_R0047  tRNA-Gly [KO:K14225]
Pjdr2_R0045  tRNA-His [KO:K14226]
Pjdr2_R0075  tRNA-His [KO:K14226]
Pjdr2_R0006  tRNA-Ile [KO:K14227]
Pjdr2_R0062  tRNA-Ile [KO:K14227]
Pjdr2_R0121  tRNA-Ile [KO:K14227]
Pjdr2_R0093  tRNA-Leu [KO:K14228]
Pjdr2_R0112  tRNA-Leu [KO:K14228]
Pjdr2_R0080  tRNA-Leu [KO:K14228]
Pjdr2_R0056  tRNA-Leu [KO:K14228]
Pjdr2_R0098  tRNA-Leu [KO:K14228]
Pjdr2_R0099  tRNA-Leu [KO:K14228]
Pjdr2_R0037  tRNA-Leu [KO:K14228]
Pjdr2_R0103  tRNA-Leu [KO:K14228]
Pjdr2_R0038  tRNA-Leu [KO:K14228]
Pjdr2_R0021  tRNA-Lys [KO:K14229]
Pjdr2_R0104  tRNA-Lys [KO:K14229]
Pjdr2_R0113  tRNA-Lys [KO:K14229]
Pjdr2_R0036  tRNA-Lys [KO:K14229]
Pjdr2_R0016  tRNA-Met [KO:K14230]
Pjdr2_R0031  tRNA-Met [KO:K14230]
Pjdr2_R0053  tRNA-Met [KO:K14230]
Pjdr2_R0069  tRNA-Met [KO:K14230]
Pjdr2_R0095  tRNA-Met [KO:K14230]
Pjdr2_R0094  tRNA-Met [KO:K14230]
Pjdr2_R0071  tRNA-Phe [KO:K14231]
Pjdr2_R0019  tRNA-Phe [KO:K14231]
Pjdr2_R0033  tRNA-Phe [KO:K14231]
Pjdr2_R0040  tRNA-Pro [KO:K14232]
Pjdr2_R0059  tRNA-Pro [KO:K14232]
Pjdr2_R0109  tRNA-Pro [KO:K14232]
Pjdr2_R0097  tRNA-Pro [KO:K14232]
Pjdr2_R0010  tRNA-Ser [KO:K14233]
Pjdr2_R0127  tRNA-Ser [KO:K14233]
Pjdr2_R0106  tRNA-Ser [KO:K14233]
Pjdr2_R0028  tRNA-Ser [KO:K14233]
Pjdr2_R0066  tRNA-Ser [KO:K14233]
Pjdr2_R0117  tRNA-Thr [KO:K14234]
Pjdr2_R0034  tRNA-Thr [KO:K14234]
Pjdr2_R0091  tRNA-Thr [KO:K14234]
Pjdr2_R0055  tRNA-Thr [KO:K14234]
Pjdr2_R0096  tRNA-Thr [KO:K14234]
Pjdr2_R0072  tRNA-Thr [KO:K14234]
Pjdr2_R0041  tRNA-Thr [KO:K14234]
Pjdr2_R0074  tRNA-Trp [KO:K14235]
Pjdr2_R0020  tRNA-Tyr [KO:K14236]
Pjdr2_R0035  tRNA-Tyr [KO:K14236]
Pjdr2_R0073  tRNA-Tyr [KO:K14236]
Pjdr2_R0017  tRNA-Val [KO:K14237]
Pjdr2_R0115  tRNA-Val [KO:K14237]
Pjdr2_R0068  tRNA-Val [KO:K14237]
Pjdr2_R0052  tRNA-Val [KO:K14237]
Pjdr2_R0030  tRNA-Val [KO:K14237]
Pjdr2_R0092  tRNA-Val [KO:K14237]
Pjdr2_3346  Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
Pjdr2_1090  glutamyl-tRNA(Gln) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.7 6.3.5.6]
Pjdr2_1091  glutamyl-tRNA(Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.7 6.3.5.6]
Pjdr2_1089  glutamyl-tRNA(Gln) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.7 6.3.5.6]
Pjdr2_5868  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Pjdr2_4346  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Pjdr2_4375  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Pjdr2_2239  glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
Pjdr2_2240  glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
Pjdr2_1002  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Pjdr2_4792  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Pjdr2_0093  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Pjdr2_6148  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Pjdr2_0940  pyridoxal phosphate-dependent enzyme [KO:K01042] [EC:2.9.1.1]
Pjdr2_5704  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Pjdr2_2273  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Pjdr2_3139  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Pjdr2_3754  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Pjdr2_4429  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Pjdr2_2189  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Pjdr2_3873  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Pjdr2_0084  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
Pjdr2_5355  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Pjdr2_0134  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Pjdr2_3812  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Pjdr2_3413  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Pjdr2_4376  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Pjdr2_0932  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Pjdr2_1383  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Pjdr2_1384  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
Pjdr2_1515  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Pjdr2_4883  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Pjdr2_1924  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
KO pathway
ko00970   

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