KEGG   PATHWAY: ppi00970Help
Entry
ppi00970                    Pathway                                

Name
Aminoacyl-tRNA biosynthesis - Pseudomonas putida ND6
Class
Genetic Information Processing; Translation
BRITE hierarchy
Pathway map
ppi00970  Aminoacyl-tRNA biosynthesis
ppi00970

Ortholog table
Module
ppi_M00360  Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:ppi00970]
Organism
Pseudomonas putida ND6 [GN:ppi]
Gene
YSA_11417  tRNA-Ala [KO:K14218]
YSA_01287  tRNA-Ala [KO:K14218]
YSA_11427  tRNA-Ala [KO:K14218]
YSA_11437  tRNA-Ala [KO:K14218]
YSA_03286  tRNA-Ala [KO:K14218]
YSA_05882  tRNA-Ala [KO:K14218]
YSA_07375  tRNA-Ala [KO:K14218]
YSA_07960  tRNA-Arg [KO:K14219]
YSA_07961  tRNA-Arg [KO:K14219]
YSA_01233  tRNA-Arg [KO:K14219]
YSA_05405  tRNA-Arg [KO:K14219]
YSA_07959  tRNA-Arg [KO:K14219]
YSA_07962  tRNA-Arg [KO:K14219]
YSA_07975  tRNA-Arg [KO:K14219]
YSA_11442  tRNA-Asn [KO:K14220]
YSA_06303  tRNA-Asn [KO:K14220]
YSA_11392  tRNA-Asp [KO:K14221]
YSA_11397  tRNA-Asp [KO:K14221]
YSA_11402  tRNA-Asp [KO:K14221]
YSA_11477  tRNA-Asp [KO:K14221]
YSA_11487  tRNA-Asp [KO:K14221]
YSA_09012  tRNA-Cys [KO:K14222]
YSA_01123  tRNA-Gln [KO:K14223]
YSA_06511  tRNA-Gln [KO:K14223]
YSA_11412  tRNA-Glu [KO:K14224]
YSA_11422  tRNA-Glu [KO:K14224]
YSA_11432  tRNA-Glu [KO:K14224]
YSA_11457  tRNA-Glu [KO:K14224]
YSA_11467  tRNA-Glu [KO:K14224]
YSA_11557  tRNA-Gly [KO:K14225]
YSA_11447  tRNA-Gly [KO:K14225]
YSA_11452  tRNA-Gly [KO:K14225]
YSA_11462  tRNA-Gly [KO:K14225]
YSA_11497  tRNA-Gly [KO:K14225]
YSA_08652  tRNA-Gly [KO:K14225]
YSA_01230  tRNA-His [KO:K14226]
YSA_01232  tRNA-His [KO:K14226]
YSA_03287  tRNA-Ile [KO:K14227]
YSA_01288  tRNA-Ile [KO:K14227]
YSA_05881  tRNA-Ile [KO:K14227]
YSA_07374  tRNA-Ile [KO:K14227]
YSA_01231  tRNA-Leu [KO:K14228]
YSA_03289  tRNA-Leu [KO:K14228]
YSA_03876  tRNA-Leu [KO:K14228]
YSA_03877  tRNA-Leu [KO:K14228]
YSA_06752  tRNA-Leu [KO:K14228]
YSA_09235  tRNA-Leu [KO:K14228]
YSA_06305  tRNA-Lys [KO:K14229]
YSA_06301  tRNA-Lys [KO:K14229]
YSA_07534  tRNA-Lys [KO:K14229]
YSA_03288  tRNA-Met [KO:K14230]
YSA_05779  tRNA-Met [KO:K14230]
YSA_06468  tRNA-Met [KO:K14230]
YSA_07481  tRNA-Met [KO:K14230]
YSA_07479  tRNA-Met [KO:K14230]
YSA_07477  tRNA-Met [KO:K14230]
YSA_05577  tRNA-Phe [KO:K14231]
YSA_00894  tRNA-Pro [KO:K14232]
YSA_01535  tRNA-Pro [KO:K14232]
YSA_06306  tRNA-Pro [KO:K14232]
YSA_06304  tRNA-Pro [KO:K14232]
YSA_11472  tRNA-Ser [KO:K14233]
YSA_07958  tRNA-Ser [KO:K14233]
YSA_08796  tRNA-Ser [KO:K14233]
YSA_05550  tRNA-Thr [KO:K14234]
YSA_11562  tRNA-Thr [KO:K14234]
YSA_06327  tRNA-Thr [KO:K14234]
YSA_11567  tRNA-Trp [KO:K14235]
YSA_11552  tRNA-Tyr [KO:K14236]
YSA_00944  tRNA-Val [KO:K14237]
YSA_00945  tRNA-Val [KO:K14237]
YSA_11482  tRNA-Val [KO:K14237]
YSA_11492  tRNA-Val [KO:K14237]
YSA_11407  tRNA-Val [KO:K14237]
YSA_01871  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
YSA_06277  putative amidase [KO:K02433] [EC:6.3.5.7 6.3.5.6]
YSA_06957  aspartyl/glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.7 6.3.5.6]
YSA_06956  aspartyl/glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.7 6.3.5.6]
YSA_06958  glutamyl-tRNA amidotransferase, C subunit [KO:K02435] [EC:6.3.5.7 6.3.5.6]
YSA_10029  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
YSA_07953  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
YSA_07507  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
YSA_05090  glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
YSA_05087  glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
YSA_00909  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
YSA_08774  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
YSA_06005  selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
YSA_10030  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
YSA_07273  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
YSA_05101  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
YSA_07038  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
YSA_03698  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
YSA_06257  IleS [KO:K01870] [EC:6.1.1.5]
YSA_02655  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
YSA_04314  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
YSA_07489  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
YSA_06791  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
YSA_00903  phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
YSA_00901  phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
YSA_05878  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
YSA_03038  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
KO pathway
ko00970   

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