KEGG   PATHWAY: ppr00230
Entry
ppr00230                    Pathway                                
Name
Purine metabolism - Photobacterium profundum
Class
Metabolism; Nucleotide metabolism
Pathway map
ppr00230  Purine metabolism
ppr00230

Module
ppr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppr00230]
ppr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppr00230]
ppr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppr00230]
ppr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppr00230]
ppr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppr00230]
ppr_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ppr00230]
ppr_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ppr00230]
Other DBs
GO: 0006163 0042278
Organism
Photobacterium profundum [GN:ppr]
Gene
PBPRA0451  PLU3953; Putative MutT/nudix family protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
PBPRB0986  PRO0317; hypothetical MutT/nudix family protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
PBPRA3470  STM3494; putative MutT/nudix family protein [KO:K08312] [EC:3.6.1.-]
PBPRA0632  putative phosphopentomutase [KO:K01839] [EC:5.4.2.7]
PBPRA2782  YHFW; hypothetical mutase [KO:K01839] [EC:5.4.2.7]
PBPRA1040  S0616; putative phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PBPRA2849  S1294; putative phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
PBPRA2648  YPO2772; putative glutamine phosphoribosylpyrophosphate amidotransferase [KO:K00764] [EC:2.4.2.14]
PBPRA3420  VV3143; putative phosphoribosylamine-glycine ligase [KO:K01945] [EC:6.3.4.13]
PBPRA2911  S2693; putative phosphoribosylglycinamide formyltransferase 2 [KO:K11175] [EC:2.1.2.2]
PBPRA1685  STM1883; putative phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
PBPRA0788  PLU3317; Putative phosphoribosylformylglycinamidine (FGAM) synthase [KO:K01952] [EC:6.3.5.3]
PBPRA2910  PURM; putative phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
PBPRA3574  PURK; Hypothetical phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
PBPRA1469  putative phosphoribosylaminoimidazole-succinocar boxamide synthase [KO:K01923] [EC:6.3.2.6]
PBPRA1145  T1688; putative adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
PBPRA3419  SF4078; putative osphoribosylaminoimidazolecarboxamideformyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
PBPRA1016  S0421; putative adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
PBPRB0897  SO3317; hypothetical 5`-nucleotidase [KO:K01081] [EC:3.1.3.5]
PBPRB1892  hypothetical protein [KO:K01081] [EC:3.1.3.5]
PBPRA2836  ECS0533; Predicted orf [KO:K11751] [EC:3.1.3.5 3.6.1.45]
PBPRA3074  putative acid phosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
PBPRA1026  YPO3095; Putative inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
PBPRA1908  SF0422; putative inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
PBPRA0633  C5468; putative purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
PBPRB0062  DEOD; putative purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
PBPRA3416  Y0973; conserved hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
PBPRA3020  C3115; conserved hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
PBPRA3180  T0175; putative hypoxanthine ribosyl transferase [KO:K00760] [EC:2.4.2.8]
PBPRA1638  hypothetical protein [KO:K00760] [EC:2.4.2.8]
PBPRA0780  T0346; putative inosine-5-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
PBPRA0759  PLU1372; putative nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
PBPRA0643  VV0708; conserved hypothetical protein [KO:K01529] [EC:3.6.1.73]
PBPRA3148  S3149; hypothetical Xanthosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
PBPRA0836  PLU1241; Putative xanthine-guanine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
PBPRA1939  hypothetical dehydrogenase [KO:K13479] [EC:1.17.1.4]
PBPRA2243  SMB21011; putative xanthine dehydrogenase, XdhA subunit [KO:K13481] [EC:1.17.1.4]
PBPRA2244  AGR_C_42; putative xanthine dehydrogenase, XdhB subunit [KO:K13482] [EC:1.17.1.4]
PBPRA0781  putative GMP synthase [KO:K01951] [EC:6.3.5.2]
PBPRB1716  S0103; putative GMP reductase [KO:K00364] [EC:1.7.1.7]
PBPRA1930  SMB21293; putative guanine aminohydrolase [KO:K01487] [EC:3.5.4.3]
PBPRA2246  GUAD; putative guanine aminohydrolase [KO:K01487] [EC:3.5.4.3]
PBPRA0191  GMK; putative guanylate kinase [KO:K00942] [EC:2.7.4.8]
PBPRA2459  SF2316; putative ribonucleoside-diphosphate reductase,alpha subunit [KO:K00525] [EC:1.17.4.1]
PBPRA2142  PA5497; conserved hypothetical protein [KO:K00525] [EC:1.17.4.1]
PBPRA2460  NRDB; putative ribonucleoside-diphosphate reductase,beta subunit [KO:K00526] [EC:1.17.4.1]
PBPRB0442  S4514; putative anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
PBPRA2536  S0155; hypothetical deoxyguanosinetriphosphatetriphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PBPRA2628  Putative deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PBPRA2627  SF2367; putative hydrolase of HD superfamily [KO:K08722] [EC:3.1.3.89]
PBPRB0909  XAC1185; hypothetical protein [KO:K21138] [EC:3.1.7.2]
PBPRA0189  C4475; putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
PBPRA3543  SF3852; putative exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PBPRA0724  PLU2764; putative exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PBPRA3082  Y0811; putative GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
PBPRA3526  CYAA; putative adenylate cyclase [KO:K05851] [EC:4.6.1.1]
PBPRB0776  YPO1178; putative adenylate cyclase CyaB [KO:K05873] [EC:4.6.1.1]
PBPRA3345  S4600; putative adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
PBPRB1785  VVA1235; putative adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
PBPRB1786  VV20768; putative adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
PBPRA3496  putative adenosine deaminase [KO:K01488] [EC:3.5.4.4]
PBPRA2985  STY3108; conserved hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
PBPRB1379  SAV5577; putative adenosine deaminase [KO:K21053] [EC:3.5.4.2]
PBPRB1184  SAV5577; putative adenosine deaminase [KO:K21053] [EC:3.5.4.2]
PBPRA3313  SF4273; putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PBPRB1234  CPDC; putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PBPRA1024  S0426; putative adenylate kinase [KO:K00939] [EC:2.7.4.3]
PBPRA3081  STY3083; putative MazG protein [KO:K04765] [EC:3.6.1.9]
PBPRA0453  PLU3952; putative cyclic AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
PBPRA1658  hypothetical protein [KO:K03651] [EC:3.1.4.53]
PBPRA1434  SLL0509; hypothetical Ap4A phosphorylase II [KO:K00988] [EC:2.7.7.5 2.7.7.53]
PBPRA0400  S0048; putative bis(5-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
PBPRA3308  SF2773; putative adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
PBPRA3310  CYSN; putative sulfate adenylate transferase, subunit 1 [KO:K00956] [EC:2.7.7.4]
PBPRA3311  VV0411; putative sulfate adenylate transferase,subunit 2 [KO:K00957] [EC:2.7.7.4]
PBPRA2264  AGR_C_42; putative transthyretin family protein [KO:K07127] [EC:3.5.2.17]
PBPRA2262  RSC2121; conserved hypothetical protein [KO:K13485] [EC:4.1.1.97]
PBPRA2263  RB1169; putative polysaccharide deacetylase family protein [KO:K16842] [EC:3.5.2.5]
PBPRA2261  RB0787; putative allantoicase [KO:K01477] [EC:3.5.3.4]
PBPRA2260  putative ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
PBPRA0476  CV3780; putative carbamate kinase [KO:K00926] [EC:2.7.2.2]
PBPRB1784  T4500; hypothetical carbamate kinase [KO:K00926] [EC:2.7.2.2]
PBPRB1918  CV3780; putative carbamate kinase [KO:K00926] [EC:2.7.2.2]
PBPRA1990  STY0580; putative carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ppr00030  Pentose phosphate pathway
ppr00220  Arginine biosynthesis
ppr00250  Alanine, aspartate and glutamate metabolism
ppr00260  Glycine, serine and threonine metabolism
ppr00340  Histidine metabolism
ppr00630  Glyoxylate and dicarboxylate metabolism
ppr00730  Thiamine metabolism
ppr00740  Riboflavin metabolism
ppr00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (84)   
   KEGG GENES (84)   
All databases (85)   

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