KEGG   PATHWAY: pps03022
Entry
pps03022                    Pathway                                
Name
Basal transcription factors - Pan paniscus (bonobo)
Class
Genetic Information Processing; Transcription
Pathway map
pps03022  Basal transcription factors
pps03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Pan paniscus (bonobo) [GN:pps]
Gene
100973812  GTF2A1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
100988722  GTF2A1L; TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
100986293  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
100993649  GTF2B; transcription initiation factor IIB [KO:K03124]
100977267  TBP; TATA-box-binding protein isoform X1 [KO:K03120]
100986094  TBPL2; TATA box-binding protein-like protein 2 [KO:K03120]
100982500  TBPL1; TATA box-binding protein-like protein 1 isoform X1 [KO:K03120]
100970654  TAF1L; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
100986016  TAF1; transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
100969203  TAF2; transcription initiation factor TFIID subunit 2 isoform X3 [KO:K03128]
100992137  TAF7L; transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03132]
100986188  TAF7; transcription initiation factor TFIID subunit 7 [KO:K03132]
100971225  TAF8; transcription initiation factor TFIID subunit 8 isoform X2 [KO:K14649]
100976081  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
100987353  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
100993533  TAF5; transcription initiation factor TFIID subunit 5 [KO:K03130]
100988287  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
100972687  TAF4B; transcription initiation factor TFIID subunit 4B isoform X1 [KO:K03129]
100970035  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
100991350  TAF12; transcription initiation factor TFIID subunit 12 [KO:K03126]
100985996  TAF6; transcription initiation factor TFIID subunit 6 isoform X3 [KO:K03131]
100982057  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1 [KO:K03131]
100989865  TAF9; transcription initiation factor TFIID subunit 9 [KO:K14535]
100988630  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K03133]
100971864  TAF11; transcription initiation factor TFIID subunit 11 isoform X1 [KO:K03135]
117977872  putative TAF11-like protein ENSP00000332601 [KO:K03135]
117980224  putative TAF11-like protein ENSP00000332601 [KO:K03135]
100968300  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
100967329  TAF15; TATA-binding protein-associated factor 2N isoform X1 [KO:K14651]
100975270  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
100978352  GTF2E2; transcription initiation factor IIE subunit beta [KO:K03137]
100989951  GTF2F1; general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
100986478  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
100986438  GTF2H1; general transcription factor IIH subunit 1 isoform X2 [KO:K03141]
100987487  GTF2H2C; general transcription factor IIH subunit 2-like protein [KO:K03142]
100975297  GTF2H3; general transcription factor IIH subunit 3 isoform X2 [KO:K03143]
103784210  GTF2H4; general transcription factor IIH subunit 4 [KO:K03144]
100974069  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB isoform X1 [KO:K10843] [EC:5.6.2.4]
100990628  ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X2 [KO:K10844] [EC:5.6.2.3]
100976031  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
100991412  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
100968110  MNAT1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
100978618  CCNH; cyclin-H isoform X3 [KO:K06634]
100977963  GTF2I; general transcription factor II-I isoform X2 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
pps03020  RNA polymerase
pps03420  Nucleotide excision repair
KO pathway
ko03022   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG GENES (44)   
All databases (45)   

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