KEGG   PATHWAY: psf00040
Entry
psf00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Pseudovibrio sp. FO-BEG1
Class
Metabolism; Carbohydrate metabolism
Pathway map
psf00040  Pentose and glucuronate interconversions
psf00040

Module
psf_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:psf00040]
psf_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:psf00040]
Organism
Pseudovibrio sp. FO-BEG1 [GN:psf]
Gene
PSE_2878  kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
PSE_2877  short-chain dehydrogenase/reductase SDR [KO:K00065] [EC:1.1.1.127]
PSE_1313  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
PSE_p0105  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
PSE_p0104  tagaturonate reductase (altronate oxidoreductase) [KO:K00041] [EC:1.1.1.58]
PSE_p0103  altronate dehydratase [KO:K01685] [EC:4.2.1.7]
PSE_1136  SAF domain protein [KO:K16849] [EC:4.2.1.7]
PSE_1135  protein containing D-galactarate dehydratase/Altronate hydrolase, C-terminal domain [KO:K16850] [EC:4.2.1.7]
PSE_1321  uxuA; Mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
PSE_1314  mannitol dehydrogenase family protein [KO:K00040] [EC:1.1.1.57]
PSE_1319  Beta-galactosidase [KO:K01195] [EC:3.2.1.31]
PSE_2590  tuaD; udp-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
PSE_3207  exoN; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
PSE_5041  aldo/keto reductase family protein [KO:K00002] [EC:1.1.1.2]
PSE_0450  lyx; L-xylulose kinase [KO:K00880] [EC:2.7.1.53]
PSE_4036  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
PSE_1302  Dihydroxy-acid and 6-phosphogluconate dehydratase [KO:K22186] [EC:4.2.1.82]
PSE_p0205  ketoglutarate semialdehyde dehydrogenase [KO:K13877] [EC:1.2.1.26]
PSE_1183  aldehyde dehydrogenase family protein [KO:K22187] [EC:1.2.1.-]
PSE_2368  ribitol kinase [KO:K00875] [EC:2.7.1.47]
PSE_2519  fucA; L-fuculose phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
psf00010  Glycolysis / Gluconeogenesis
psf00020  Citrate cycle (TCA cycle)
psf00030  Pentose phosphate pathway
psf00052  Galactose metabolism
psf00053  Ascorbate and aldarate metabolism
psf00500  Starch and sucrose metabolism
psf00520  Amino sugar and nucleotide sugar metabolism
psf00561  Glycerolipid metabolism
psf00562  Inositol phosphate metabolism
psf00740  Riboflavin metabolism
KO pathway
ko00040   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG GENES (21)   
All databases (22)   

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