KEGG   PATHWAY: raq01100
Entry
raq01100                    Pathway                                
Name
Metabolic pathways - Rahnella aquatilis CIP 78.65 = ATCC 33071
Class
Pathway map
raq01100  Metabolic pathways
raq01100

Module
raq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:raq01100]
raq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:raq01100]
raq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:raq01100]
raq_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:raq01100]
raq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:raq01100]
raq_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:raq01100]
raq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:raq01100]
raq_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:raq01100]
raq_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:raq01100]
raq_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:raq01100]
raq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:raq01100]
raq_M00012  Glyoxylate cycle [PATH:raq01100]
raq_M00015  Proline biosynthesis, glutamate => proline [PATH:raq01100]
raq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:raq01100]
raq_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:raq01100]
raq_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:raq01100]
raq_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:raq01100]
raq_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:raq01100]
raq_M00021  Cysteine biosynthesis, serine => cysteine [PATH:raq01100]
raq_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:raq01100]
raq_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:raq01100]
raq_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:raq01100]
raq_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:raq01100]
raq_M00026  Histidine biosynthesis, PRPP => histidine [PATH:raq01100]
raq_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:raq01100]
raq_M00034  Methionine salvage pathway [PATH:raq01100]
raq_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:raq01100]
raq_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:raq01100]
raq_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:raq01100]
raq_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:raq01100]
raq_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:raq01100]
raq_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:raq01100]
raq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:raq01100]
raq_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:raq01100]
raq_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:raq01100]
raq_M00063  CMP-KDO biosynthesis [PATH:raq01100]
raq_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:raq01100]
raq_M00082  Fatty acid biosynthesis, initiation [PATH:raq01100]
raq_M00083  Fatty acid biosynthesis, elongation [PATH:raq01100]
raq_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:raq01100]
raq_M00087  beta-Oxidation [PATH:raq01100]
raq_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:raq01100]
raq_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:raq01100]
raq_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:raq01100]
raq_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:raq01100]
raq_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:raq01100]
raq_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:raq01100]
raq_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:raq01100]
raq_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:raq01100]
raq_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:raq01100]
raq_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:raq01100]
raq_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:raq01100]
raq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:raq01100]
raq_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:raq01100]
raq_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:raq01100]
raq_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:raq01100]
raq_M00149  Succinate dehydrogenase, prokaryotes [PATH:raq01100]
raq_M00150  Fumarate reductase, prokaryotes [PATH:raq01100]
raq_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:raq01100]
raq_M00168  CAM (Crassulacean acid metabolism), dark [PATH:raq01100]
raq_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:raq01100]
raq_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:raq01100]
raq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:raq01100]
raq_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:raq01100]
raq_M00417  Cytochrome o ubiquinol oxidase [PATH:raq01100]
raq_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:raq01100]
raq_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:raq01100]
raq_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:raq01100]
raq_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:raq01100]
raq_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:raq01100]
raq_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:raq01100]
raq_M00555  Betaine biosynthesis, choline => betaine [PATH:raq01100]
raq_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:raq01100]
raq_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:raq01100]
raq_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:raq01100]
raq_M00621  Glycine cleavage system [PATH:raq01100]
raq_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:raq01100]
raq_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:raq01100]
raq_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:raq01100]
raq_M00793  dTDP-L-rhamnose biosynthesis [PATH:raq01100]
raq_M00844  Arginine biosynthesis, ornithine => arginine [PATH:raq01100]
raq_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:raq01100]
raq_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:raq01100]
raq_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:raq01100]
raq_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:raq01100]
raq_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:raq01100]
raq_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:raq01100]
raq_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:raq01100]
raq_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:raq01100]
raq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:raq01100]
raq_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:raq01100]
raq_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:raq01100]
raq_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:raq01100]
raq_M00970  Proline degradation, proline => glutamate [PATH:raq01100]
Organism
Rahnella aquatilis CIP 78.65 = ATCC 33071 [GN:raq]
Related
pathway
raq00010  Glycolysis / Gluconeogenesis
raq00020  Citrate cycle (TCA cycle)
raq00030  Pentose phosphate pathway
raq00040  Pentose and glucuronate interconversions
raq00051  Fructose and mannose metabolism
raq00052  Galactose metabolism
raq00053  Ascorbate and aldarate metabolism
raq00061  Fatty acid biosynthesis
raq00071  Fatty acid degradation
raq00130  Ubiquinone and other terpenoid-quinone biosynthesis
raq00190  Oxidative phosphorylation
raq00220  Arginine biosynthesis
raq00230  Purine metabolism
raq00240  Pyrimidine metabolism
raq00250  Alanine, aspartate and glutamate metabolism
raq00260  Glycine, serine and threonine metabolism
raq00261  Monobactam biosynthesis
raq00270  Cysteine and methionine metabolism
raq00280  Valine, leucine and isoleucine degradation
raq00290  Valine, leucine and isoleucine biosynthesis
raq00300  Lysine biosynthesis
raq00310  Lysine degradation
raq00330  Arginine and proline metabolism
raq00332  Carbapenem biosynthesis
raq00340  Histidine metabolism
raq00350  Tyrosine metabolism
raq00360  Phenylalanine metabolism
raq00361  Chlorocyclohexane and chlorobenzene degradation
raq00362  Benzoate degradation
raq00364  Fluorobenzoate degradation
raq00380  Tryptophan metabolism
raq00400  Phenylalanine, tyrosine and tryptophan biosynthesis
raq00401  Novobiocin biosynthesis
raq00410  beta-Alanine metabolism
raq00430  Taurine and hypotaurine metabolism
raq00440  Phosphonate and phosphinate metabolism
raq00450  Selenocompound metabolism
raq00460  Cyanoamino acid metabolism
raq00470  D-Amino acid metabolism
raq00480  Glutathione metabolism
raq00500  Starch and sucrose metabolism
raq00511  Other glycan degradation
raq00520  Amino sugar and nucleotide sugar metabolism
raq00521  Streptomycin biosynthesis
raq00523  Polyketide sugar unit biosynthesis
raq00525  Acarbose and validamycin biosynthesis
raq00540  Lipopolysaccharide biosynthesis
raq00541  O-Antigen nucleotide sugar biosynthesis
raq00542  O-Antigen repeat unit biosynthesis
raq00543  Exopolysaccharide biosynthesis
raq00550  Peptidoglycan biosynthesis
raq00552  Teichoic acid biosynthesis
raq00561  Glycerolipid metabolism
raq00562  Inositol phosphate metabolism
raq00564  Glycerophospholipid metabolism
raq00565  Ether lipid metabolism
raq00592  alpha-Linolenic acid metabolism
raq00600  Sphingolipid metabolism
raq00620  Pyruvate metabolism
raq00622  Xylene degradation
raq00623  Toluene degradation
raq00625  Chloroalkane and chloroalkene degradation
raq00626  Naphthalene degradation
raq00627  Aminobenzoate degradation
raq00630  Glyoxylate and dicarboxylate metabolism
raq00633  Nitrotoluene degradation
raq00640  Propanoate metabolism
raq00650  Butanoate metabolism
raq00660  C5-Branched dibasic acid metabolism
raq00670  One carbon pool by folate
raq00680  Methane metabolism
raq00730  Thiamine metabolism
raq00740  Riboflavin metabolism
raq00750  Vitamin B6 metabolism
raq00760  Nicotinate and nicotinamide metabolism
raq00770  Pantothenate and CoA biosynthesis
raq00780  Biotin metabolism
raq00785  Lipoic acid metabolism
raq00790  Folate biosynthesis
raq00791  Atrazine degradation
raq00860  Porphyrin metabolism
raq00900  Terpenoid backbone biosynthesis
raq00903  Limonene degradation
raq00907  Pinene, camphor and geraniol degradation
raq00910  Nitrogen metabolism
raq00920  Sulfur metabolism
raq00930  Caprolactam degradation
raq00946  Degradation of flavonoids
raq00999  Biosynthesis of various plant secondary metabolites
raq01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (945)   
   KEGG GENES (945)   
All databases (946)   

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