KEGG   PATHWAY: sap03430
Entry
sap03430                    Pathway                                
Name
Mismatch repair - Sulfobacillus acidophilus DSM 10332
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
sap03430  Mismatch repair
sap03430

Other DBs
GO: 0006298
Organism
Sulfobacillus acidophilus DSM 10332 [GN:sap]
Gene
Sulac_1843  DNA mismatch repair protein MutS [KO:K03555]
Sulac_1398  MutS2 protein [KO:K07456]
Sulac_1842  DNA mismatch repair protein MutL [KO:K03572]
Sulac_2664  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
Sulac_0061  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
Sulac_1619  Exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
Sulac_1620  Exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
Sulac_1540  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
Sulac_3508  single-strand binding protein [KO:K03111]
Sulac_0664  single-strand binding protein [KO:K03111]
Sulac_1486  DNA polymerase III, alpha subunit [KO:K02337] [EC:2.7.7.7]
Sulac_1906  DNA polymerase III polC-type [KO:K03763] [EC:2.7.7.7]
Sulac_0002  DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
Sulac_1209  DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
Sulac_0117  DNA polymerase III, subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
Sulac_2956  DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
Sulac_0152  hypothetical protein [KO:K02341] [EC:2.7.7.7]
Sulac_1148  RNAse T [KO:K02342] [EC:2.7.7.7]
Sulac_2663  DNA ligase [KO:K01972] [EC:6.5.1.2]
Sulac_3471  DNA adenine methylase Dam [KO:K06223] [EC:2.1.1.72]
Sulac_1161  D12 class N6 adenine-specific DNA methyltransferase [KO:K06223] [EC:2.1.1.72]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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