KEGG   PATHWAY: srl01100
Entry
srl01100                    Pathway                                
Name
Metabolic pathways - Serratia plymuthica 4Rx13
Class
Pathway map
srl01100  Metabolic pathways
srl01100

Module
srl_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:srl01100]
srl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:srl01100]
srl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:srl01100]
srl_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:srl01100]
srl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:srl01100]
srl_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:srl01100]
srl_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:srl01100]
srl_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:srl01100]
srl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:srl01100]
srl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:srl01100]
srl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:srl01100]
srl_M00012  Glyoxylate cycle [PATH:srl01100]
srl_M00015  Proline biosynthesis, glutamate => proline [PATH:srl01100]
srl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:srl01100]
srl_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:srl01100]
srl_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:srl01100]
srl_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:srl01100]
srl_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:srl01100]
srl_M00021  Cysteine biosynthesis, serine => cysteine [PATH:srl01100]
srl_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:srl01100]
srl_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:srl01100]
srl_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:srl01100]
srl_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:srl01100]
srl_M00026  Histidine biosynthesis, PRPP => histidine [PATH:srl01100]
srl_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:srl01100]
srl_M00034  Methionine salvage pathway [PATH:srl01100]
srl_M00035  Methionine degradation [PATH:srl01100]
srl_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:srl01100]
srl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:srl01100]
srl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:srl01100]
srl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:srl01100]
srl_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:srl01100]
srl_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:srl01100]
srl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:srl01100]
srl_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:srl01100]
srl_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:srl01100]
srl_M00063  CMP-KDO biosynthesis [PATH:srl01100]
srl_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:srl01100]
srl_M00082  Fatty acid biosynthesis, initiation [PATH:srl01100]
srl_M00083  Fatty acid biosynthesis, elongation [PATH:srl01100]
srl_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:srl01100]
srl_M00087  beta-Oxidation [PATH:srl01100]
srl_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:srl01100]
srl_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:srl01100]
srl_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:srl01100]
srl_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:srl01100]
srl_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:srl01100]
srl_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:srl01100]
srl_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:srl01100]
srl_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:srl01100]
srl_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:srl01100]
srl_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:srl01100]
srl_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:srl01100]
srl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:srl01100]
srl_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:srl01100]
srl_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:srl01100]
srl_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:srl01100]
srl_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:srl01100]
srl_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:srl01100]
srl_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:srl01100]
srl_M00149  Succinate dehydrogenase, prokaryotes [PATH:srl01100]
srl_M00150  Fumarate reductase, prokaryotes [PATH:srl01100]
srl_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:srl01100]
srl_M00168  CAM (Crassulacean acid metabolism), dark [PATH:srl01100]
srl_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:srl01100]
srl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srl01100]
srl_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:srl01100]
srl_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:srl01100]
srl_M00417  Cytochrome o ubiquinol oxidase [PATH:srl01100]
srl_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:srl01100]
srl_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:srl01100]
srl_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:srl01100]
srl_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:srl01100]
srl_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:srl01100]
srl_M00555  Betaine biosynthesis, choline => betaine [PATH:srl01100]
srl_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:srl01100]
srl_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:srl01100]
srl_M00621  Glycine cleavage system [PATH:srl01100]
srl_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:srl01100]
srl_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:srl01100]
srl_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:srl01100]
srl_M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:srl01100]
srl_M00793  dTDP-L-rhamnose biosynthesis [PATH:srl01100]
srl_M00844  Arginine biosynthesis, ornithine => arginine [PATH:srl01100]
srl_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:srl01100]
srl_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:srl01100]
srl_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:srl01100]
srl_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:srl01100]
srl_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:srl01100]
srl_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:srl01100]
srl_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:srl01100]
srl_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:srl01100]
srl_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:srl01100]
srl_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:srl01100]
srl_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:srl01100]
srl_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:srl01100]
srl_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:srl01100]
srl_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:srl01100]
srl_M00970  Proline degradation, proline => glutamate [PATH:srl01100]
Organism
Serratia plymuthica 4Rx13 [GN:srl]
Related
pathway
srl00010  Glycolysis / Gluconeogenesis
srl00020  Citrate cycle (TCA cycle)
srl00030  Pentose phosphate pathway
srl00040  Pentose and glucuronate interconversions
srl00051  Fructose and mannose metabolism
srl00052  Galactose metabolism
srl00053  Ascorbate and aldarate metabolism
srl00061  Fatty acid biosynthesis
srl00071  Fatty acid degradation
srl00130  Ubiquinone and other terpenoid-quinone biosynthesis
srl00190  Oxidative phosphorylation
srl00220  Arginine biosynthesis
srl00230  Purine metabolism
srl00240  Pyrimidine metabolism
srl00250  Alanine, aspartate and glutamate metabolism
srl00260  Glycine, serine and threonine metabolism
srl00261  Monobactam biosynthesis
srl00270  Cysteine and methionine metabolism
srl00280  Valine, leucine and isoleucine degradation
srl00290  Valine, leucine and isoleucine biosynthesis
srl00300  Lysine biosynthesis
srl00310  Lysine degradation
srl00330  Arginine and proline metabolism
srl00332  Carbapenem biosynthesis
srl00340  Histidine metabolism
srl00350  Tyrosine metabolism
srl00360  Phenylalanine metabolism
srl00361  Chlorocyclohexane and chlorobenzene degradation
srl00362  Benzoate degradation
srl00364  Fluorobenzoate degradation
srl00380  Tryptophan metabolism
srl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
srl00401  Novobiocin biosynthesis
srl00404  Staurosporine biosynthesis
srl00410  beta-Alanine metabolism
srl00430  Taurine and hypotaurine metabolism
srl00440  Phosphonate and phosphinate metabolism
srl00450  Selenocompound metabolism
srl00460  Cyanoamino acid metabolism
srl00470  D-Amino acid metabolism
srl00480  Glutathione metabolism
srl00500  Starch and sucrose metabolism
srl00511  Other glycan degradation
srl00520  Amino sugar and nucleotide sugar metabolism
srl00521  Streptomycin biosynthesis
srl00523  Polyketide sugar unit biosynthesis
srl00525  Acarbose and validamycin biosynthesis
srl00540  Lipopolysaccharide biosynthesis
srl00541  O-Antigen nucleotide sugar biosynthesis
srl00542  O-Antigen repeat unit biosynthesis
srl00543  Exopolysaccharide biosynthesis
srl00550  Peptidoglycan biosynthesis
srl00552  Teichoic acid biosynthesis
srl00561  Glycerolipid metabolism
srl00562  Inositol phosphate metabolism
srl00564  Glycerophospholipid metabolism
srl00565  Ether lipid metabolism
srl00591  Linoleic acid metabolism
srl00592  alpha-Linolenic acid metabolism
srl00600  Sphingolipid metabolism
srl00620  Pyruvate metabolism
srl00623  Toluene degradation
srl00625  Chloroalkane and chloroalkene degradation
srl00626  Naphthalene degradation
srl00627  Aminobenzoate degradation
srl00630  Glyoxylate and dicarboxylate metabolism
srl00633  Nitrotoluene degradation
srl00640  Propanoate metabolism
srl00643  Styrene degradation
srl00650  Butanoate metabolism
srl00660  C5-Branched dibasic acid metabolism
srl00670  One carbon pool by folate
srl00680  Methane metabolism
srl00730  Thiamine metabolism
srl00740  Riboflavin metabolism
srl00750  Vitamin B6 metabolism
srl00760  Nicotinate and nicotinamide metabolism
srl00770  Pantothenate and CoA biosynthesis
srl00780  Biotin metabolism
srl00785  Lipoic acid metabolism
srl00790  Folate biosynthesis
srl00791  Atrazine degradation
srl00860  Porphyrin metabolism
srl00900  Terpenoid backbone biosynthesis
srl00903  Limonene degradation
srl00907  Pinene, camphor and geraniol degradation
srl00910  Nitrogen metabolism
srl00920  Sulfur metabolism
srl00930  Caprolactam degradation
srl00946  Degradation of flavonoids
srl00997  Biosynthesis of various other secondary metabolites
srl00998  Biosynthesis of various antibiotics
srl00999  Biosynthesis of various plant secondary metabolites
srl01040  Biosynthesis of unsaturated fatty acids
srl01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (999)   
   KEGG GENES (999)   
All databases (1000)   

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