KEGG   PATHWAY: syw00970
Entry
syw00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Parasynechococcus marenigrum
Class
Genetic Information Processing; Translation
Pathway map
syw00970  Aminoacyl-tRNA biosynthesis
syw00970

Organism
Parasynechococcus marenigrum [GN:syw]
Gene
RNA_23  tRNA-Ala [KO:K14218]
RNA_38  tRNA-Ala [KO:K14218]
RNA_51  tRNA-Ala [KO:K14218]
RNA_8  tRNA-Ala [KO:K14218]
RNA_6  tRNA-Arg [KO:K14219]
RNA_32  tRNA-Arg [KO:K14219]
RNA_4  tRNA-Arg [KO:K14219]
RNA_44  tRNA-Arg [KO:K14219]
RNA_54  tRNA-Asn [KO:K14220]
RNA_30  tRNA-Asp [KO:K14221]
RNA_43  tRNA-Cys [KO:K14222]
RNA_45  tRNA-Gln [KO:K14223]
RNA_14  tRNA-Glu [KO:K14224]
RNA_2  tRNA-Gly [KO:K14225]
RNA_1  tRNA-Gly [KO:K14225]
RNA_12  tRNA-Gly [KO:K14225]
RNA_26  tRNA-His [KO:K14226]
RNA_39  tRNA-Ile [KO:K14227]
RNA_52  tRNA-Ile [KO:K14227]
RNA_7  tRNA-Leu [KO:K14228]
RNA_25  tRNA-Leu [KO:K14228]
RNA_9  tRNA-Leu [KO:K14228]
RNA_24  tRNA-Leu [KO:K14228]
RNA_22  tRNA-Leu [KO:K14228]
RNA_17  tRNA-Lys [KO:K14229]
RNA_15  tRNA-Met [KO:K14230]
RNA_20  tRNA-Met [KO:K14230]
RNA_5  tRNA_Pseudo [KO:K14230]
RNA_42  tRNA-Phe [KO:K14231]
RNA_47  tRNA-Pro [KO:K14232]
RNA_16  tRNA-Pro [KO:K14232]
RNA_18  tRNA-Pro [KO:K14232]
RNA_28  tRNA-Ser [KO:K14233]
RNA_19  tRNA-Ser [KO:K14233]
RNA_46  tRNA-Ser [KO:K14233]
RNA_21  tRNA-Ser [KO:K14233]
RNA_13  tRNA-Thr [KO:K14234]
RNA_34  tRNA-Thr [KO:K14234]
RNA_41  tRNA-Thr [KO:K14234]
RNA_29  tRNA-Trp [KO:K14235]
RNA_33  tRNA-Tyr [KO:K14236]
RNA_11  tRNA-Val [KO:K14237]
RNA_55  tRNA-Val [KO:K14237]
RNA_31  tRNA-Val [KO:K14237]
SYNW0588  glutamyl-tRNA synthetase homolog [KO:K01885] [EC:6.1.1.17]
SYNW1826  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
SYNW1031  gatA; glutamyl-tRNA (Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
SYNW2356  gatB; glutamyl-tRNA (Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
SYNW0292  gatC; glutamyl-tRNA (Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
SYNW2360  alaS; Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
SYNW2426  aspS; Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I. [KO:K01876] [EC:6.1.1.12]
SYNW1671  glyQ; glycyl-tRNA synthetase alpha subunit [KO:K01878] [EC:6.1.1.14]
SYNW1096  glyS; putative Glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
SYNW1478  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
SYNW1894  serRS; putative seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
SYNW0701  cysRS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
SYNW1222  metG; putative methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
SYNW1195  fmt; putative methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
SYNW2396  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
SYNW1255  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
SYNW0289  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
SYNW0127  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
SYNW2319  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
SYNW1771  proS; Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
SYNW0197  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
SYNW1600  pheS; Phenylalanyl-tRNA synthetase [KO:K01889] [EC:6.1.1.20]
SYNW1227  pheT; Phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
SYNW0568  tyrS; t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
SYNW1475  trpS; t-RNA synthetase, class Ib:Tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
syw00250  Alanine, aspartate and glutamate metabolism
syw00260  Glycine, serine and threonine metabolism
syw00270  Cysteine and methionine metabolism
syw00290  Valine, leucine and isoleucine biosynthesis
syw00300  Lysine biosynthesis
syw00330  Arginine and proline metabolism
syw00340  Histidine metabolism
syw00380  Tryptophan metabolism
syw00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG GENES (69)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system