KEGG   PATHWAY: tps00970
Entry
tps00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Thalassiosira pseudonana
Class
Genetic Information Processing; Translation
Pathway map
tps00970  Aminoacyl-tRNA biosynthesis
tps00970

Organism
Thalassiosira pseudonana [GN:tps]
Gene
THAPSDRAFT_42226  glutamyl-trna synthetase [KO:K01885] [EC:6.1.1.17]
THAPSDRAFT_38909  predicted protein [KO:K01885] [EC:6.1.1.17]
THAPSDRAFT_13806  predicted protein [KO:K01886] [EC:6.1.1.18]
THAPSDRAFT_40774  ALATS2; alanine-trna ligase [KO:K01872] [EC:6.1.1.7]
THAPSDRAFT_38248  ALATS1; alanine-trna ligase [KO:K01872] [EC:6.1.1.7]
THAPS_6988  aspartate-tRNA ligase or aspartyl tRNA synthetase [KO:K22503] [EC:6.1.1.12]
THAPSDRAFT_268068  aspartate-trna ligase [KO:K22503] [EC:6.1.1.12]
THAPSDRAFT_26191  asparaginyl-trna synthetase [KO:K01893] [EC:6.1.1.22]
THAPSDRAFT_40463  predicted protein [KO:K01893] [EC:6.1.1.22]
THAPSDRAFT_39255  glycyl tRNA synthetase [KO:K01880] [EC:6.1.1.14]
THAPSDRAFT_40034  threonyl-trna synthetase [KO:K01868] [EC:6.1.1.3]
THAPSDRAFT_22770  predicted protein [KO:K01868] [EC:6.1.1.3]
THAPSDRAFT_269399  seryl-trna synthetase [KO:K01875] [EC:6.1.1.11]
THAPSDRAFT_262555  hypothetical protein [KO:K03341] [EC:2.9.1.2]
THAPSDRAFT_261633  CTS2; probable cysteinyl-trna synthetase [KO:K01883] [EC:6.1.1.16]
THAPSDRAFT_1499  CTS1; cysteinyl-trna synthetase [KO:K01883] [EC:6.1.1.16]
THAPSDRAFT_13572  MTS1; methionyl-trna synthetase [KO:K01874] [EC:6.1.1.10]
THAPSDRAFT_34771  MTF1; methionyl-trna formyltransferase [KO:K00604] [EC:2.1.2.9]
THAPSDRAFT_42971  valine--tRNA ligase-like protein [KO:K01873] [EC:6.1.1.9]
THAPS_269966  VTS1; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
THAPSDRAFT_39979  ITS3; probable isoleucine-trna synthetase [KO:K01869] [EC:6.1.1.4]
THAPSDRAFT_36339  ITS1; isoleucine-trna synthetase [KO:K01870] [EC:6.1.1.5]
THAPSDRAFT_26726  ITS2; isoleucine-trna synthetase [KO:K01870] [EC:6.1.1.5]
THAPSDRAFT_33044  lysyl-trna synthetase [KO:K04567] [EC:6.1.1.6]
THAPSDRAFT_29232  lysyl-trna synthetase [KO:K04567] [EC:6.1.1.6]
THAPSDRAFT_40028  arginyl-trna synthetase [KO:K01887] [EC:6.1.1.19]
THAPSDRAFT_42213  predicted protein [KO:K01887] [EC:6.1.1.19]
THAPSDRAFT_264365  prolyl-trna synthetase [KO:K01881] [EC:6.1.1.15]
THAPSDRAFT_32053  predicted protein [KO:K01881] [EC:6.1.1.15]
THAPSDRAFT_5078  histidyl-trna synthetase [KO:K01892] [EC:6.1.1.21]
THAPSDRAFT_42621  histidyl tRNA synthetase [KO:K01892] [EC:6.1.1.21]
THAPSDRAFT_25960  phenylalanyl-trna synthetase [KO:K01889] [EC:6.1.1.20]
THAPSDRAFT_24163  phenylalanine-trna synthetase-like protein [KO:K01889] [EC:6.1.1.20]
THAPSDRAFT_262926  phenylalanine tRNA synthtetase-like protein [KO:K01889] [EC:6.1.1.20]
THAPSDRAFT_33046  phenylalanyl-trna synthetase [KO:K01890] [EC:6.1.1.20]
THAPSDRAFT_15976  predicted protein [KO:K01866] [EC:6.1.1.1]
THAPSDRAFT_43160  TPS1; probable tryptophanyl tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
tps00250  Alanine, aspartate and glutamate metabolism
tps00260  Glycine, serine and threonine metabolism
tps00270  Cysteine and methionine metabolism
tps00290  Valine, leucine and isoleucine biosynthesis
tps00300  Lysine biosynthesis
tps00330  Arginine and proline metabolism
tps00340  Histidine metabolism
tps00380  Tryptophan metabolism
tps00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG GENES (37)   
All databases (38)   

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