KEGG   PATHWAY: xom01100
Entry
xom01100                    Pathway                                
Name
Metabolic pathways - Xanthomonas oryzae pv. oryzae MAFF 311018
Class
Pathway map
xom01100  Metabolic pathways
xom01100

Module
xom_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xom01100]
xom_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xom01100]
xom_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xom01100]
xom_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xom01100]
xom_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xom01100]
xom_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xom01100]
xom_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xom01100]
xom_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xom01100]
xom_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xom01100]
xom_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xom01100]
xom_M00015  Proline biosynthesis, glutamate => proline [PATH:xom01100]
xom_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xom01100]
xom_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xom01100]
xom_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xom01100]
xom_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xom01100]
xom_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xom01100]
xom_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xom01100]
xom_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xom01100]
xom_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xom01100]
xom_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:xom01100]
xom_M00034  Methionine salvage pathway [PATH:xom01100]
xom_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:xom01100]
xom_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xom01100]
xom_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xom01100]
xom_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xom01100]
xom_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xom01100]
xom_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xom01100]
xom_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xom01100]
xom_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xom01100]
xom_M00063  CMP-KDO biosynthesis [PATH:xom01100]
xom_M00082  Fatty acid biosynthesis, initiation [PATH:xom01100]
xom_M00083  Fatty acid biosynthesis, elongation [PATH:xom01100]
xom_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xom01100]
xom_M00087  beta-Oxidation [PATH:xom01100]
xom_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xom01100]
xom_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xom01100]
xom_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xom01100]
xom_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xom01100]
xom_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xom01100]
xom_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xom01100]
xom_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xom01100]
xom_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xom01100]
xom_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xom01100]
xom_M00149  Succinate dehydrogenase, prokaryotes [PATH:xom01100]
xom_M00151  Cytochrome bc1 complex respiratory unit [PATH:xom01100]
xom_M00155  Cytochrome c oxidase, prokaryotes [PATH:xom01100]
xom_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xom01100]
xom_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xom01100]
xom_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xom01100]
xom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xom01100]
xom_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xom01100]
xom_M00417  Cytochrome o ubiquinol oxidase [PATH:xom01100]
xom_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xom01100]
xom_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xom01100]
xom_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xom01100]
xom_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xom01100]
xom_M00621  Glycine cleavage system [PATH:xom01100]
xom_M00793  dTDP-L-rhamnose biosynthesis [PATH:xom01100]
xom_M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xom01100]
xom_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xom01100]
xom_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xom01100]
xom_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xom01100]
xom_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xom01100]
xom_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xom01100]
xom_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xom01100]
xom_M00970  Proline degradation, proline => glutamate [PATH:xom01100]
Organism
Xanthomonas oryzae pv. oryzae MAFF 311018 [GN:xom]
Related
pathway
xom00010  Glycolysis / Gluconeogenesis
xom00020  Citrate cycle (TCA cycle)
xom00030  Pentose phosphate pathway
xom00040  Pentose and glucuronate interconversions
xom00051  Fructose and mannose metabolism
xom00052  Galactose metabolism
xom00053  Ascorbate and aldarate metabolism
xom00061  Fatty acid biosynthesis
xom00071  Fatty acid degradation
xom00130  Ubiquinone and other terpenoid-quinone biosynthesis
xom00190  Oxidative phosphorylation
xom00220  Arginine biosynthesis
xom00230  Purine metabolism
xom00240  Pyrimidine metabolism
xom00250  Alanine, aspartate and glutamate metabolism
xom00260  Glycine, serine and threonine metabolism
xom00261  Monobactam biosynthesis
xom00270  Cysteine and methionine metabolism
xom00280  Valine, leucine and isoleucine degradation
xom00290  Valine, leucine and isoleucine biosynthesis
xom00300  Lysine biosynthesis
xom00310  Lysine degradation
xom00311  Penicillin and cephalosporin biosynthesis
xom00330  Arginine and proline metabolism
xom00332  Carbapenem biosynthesis
xom00340  Histidine metabolism
xom00350  Tyrosine metabolism
xom00360  Phenylalanine metabolism
xom00361  Chlorocyclohexane and chlorobenzene degradation
xom00362  Benzoate degradation
xom00364  Fluorobenzoate degradation
xom00380  Tryptophan metabolism
xom00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xom00401  Novobiocin biosynthesis
xom00410  beta-Alanine metabolism
xom00430  Taurine and hypotaurine metabolism
xom00450  Selenocompound metabolism
xom00460  Cyanoamino acid metabolism
xom00470  D-Amino acid metabolism
xom00480  Glutathione metabolism
xom00500  Starch and sucrose metabolism
xom00511  Other glycan degradation
xom00520  Amino sugar and nucleotide sugar metabolism
xom00521  Streptomycin biosynthesis
xom00523  Polyketide sugar unit biosynthesis
xom00525  Acarbose and validamycin biosynthesis
xom00540  Lipopolysaccharide biosynthesis
xom00541  O-Antigen nucleotide sugar biosynthesis
xom00543  Exopolysaccharide biosynthesis
xom00550  Peptidoglycan biosynthesis
xom00552  Teichoic acid biosynthesis
xom00561  Glycerolipid metabolism
xom00562  Inositol phosphate metabolism
xom00564  Glycerophospholipid metabolism
xom00565  Ether lipid metabolism
xom00592  alpha-Linolenic acid metabolism
xom00600  Sphingolipid metabolism
xom00620  Pyruvate metabolism
xom00623  Toluene degradation
xom00625  Chloroalkane and chloroalkene degradation
xom00626  Naphthalene degradation
xom00630  Glyoxylate and dicarboxylate metabolism
xom00633  Nitrotoluene degradation
xom00640  Propanoate metabolism
xom00643  Styrene degradation
xom00650  Butanoate metabolism
xom00660  C5-Branched dibasic acid metabolism
xom00670  One carbon pool by folate
xom00680  Methane metabolism
xom00730  Thiamine metabolism
xom00740  Riboflavin metabolism
xom00750  Vitamin B6 metabolism
xom00760  Nicotinate and nicotinamide metabolism
xom00770  Pantothenate and CoA biosynthesis
xom00780  Biotin metabolism
xom00785  Lipoic acid metabolism
xom00790  Folate biosynthesis
xom00860  Porphyrin metabolism
xom00900  Terpenoid backbone biosynthesis
xom00907  Pinene, camphor and geraniol degradation
xom00910  Nitrogen metabolism
xom00920  Sulfur metabolism
xom00930  Caprolactam degradation
xom00946  Degradation of flavonoids
xom00996  Biosynthesis of various alkaloids
xom00999  Biosynthesis of various plant secondary metabolites
xom01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (677)   
   KEGG GENES (677)   
All databases (678)   

Download RDF
DBGET integrated database retrieval system