KEGG   PATHWAY: xoo00240
Entry
xoo00240                    Pathway                                
Name
Pyrimidine metabolism - Xanthomonas oryzae pv. oryzae KACC 10331
Class
Metabolism; Nucleotide metabolism
Pathway map
xoo00240  Pyrimidine metabolism
xoo00240

Module
xoo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xoo00240]
xoo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xoo00240]
xoo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xoo00240]
Other DBs
GO: 0006220 0006213
Organism
Xanthomonas oryzae pv. oryzae KACC 10331 [GN:xoo]
Gene
XOO2887  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
XOO2888  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
XOO1427  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
XOO2683  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
XOO2237  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
XOO0508  pyrE; orotate phosphoribosyl transferase [KO:K00762] [EC:2.4.2.10]
XOO0247  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
XOO1974  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
XOO2535  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
XOO1790  conserved hypothetical protein [KO:K04765] [EC:3.6.1.9]
XOO3316  conserved hypothetical protein [KO:K06287] [EC:3.6.1.-]
XOO1884  Predicted metal-dependent hydrolase [KO:K07043] [EC:3.6.1.-]
XOO2967  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
XOO2179  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
XOO4323  5'-nucleotidase, putative [KO:K01081] [EC:3.1.3.5]
XOO2434  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
XOO2956  surE; survival protein [KO:K03787] [EC:3.1.3.5 3.1.3.6]
XOO2501  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
XOO3203  Predicted Rossmann fold nucleotide-binding protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
XOO3979  codA; cytosine deaminase [KO:K03365] [EC:3.5.4.1 3.5.4.21]
XOO3278  dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
XOO0474  nrdA; ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
XOO0475  nrdB; ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
XOO0431  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
XOO0497  dut; dUTPase [KO:K01520] [EC:3.6.1.23]
XOO0241  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
XOO3752  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
XOO4267  NfnB; Nitroreductase [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
Related
pathway
xoo00030  Pentose phosphate pathway
xoo00220  Arginine biosynthesis
xoo00250  Alanine, aspartate and glutamate metabolism
xoo00280  Valine, leucine and isoleucine degradation
xoo00410  beta-Alanine metabolism
KO pathway
ko00240   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG GENES (28)   
All databases (29)   

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