KEGG   Prunus avium (sweet cherry): 110751864
Entry
110751864         CDS       T05161                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110751864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110751864
   03009 Ribosome biogenesis [BR:pavi03009]
    110751864
Enzymes [BR:pavi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110751864
Spliceosome [BR:pavi03041]
 Complex A
  U1 snRNP components
   U1 related factors
    110751864
 Complex B
    110751864
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110751864
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW Transformer RSRP
Other DBs
NCBI-GeneID: 110751864
NCBI-ProteinID: XP_021808090
UniProt: A0A6P5RTA7
Position
Unknown
AA seq 1137 aa
MATAEPAGPRYAPDDPTLPNPWKGLIDGSTGLLYYWNPETNITQYEKPASLPPPLPPGPP
PATTTPKLAATPVPHSMPPNGVVSQDGPPITQAPQQQGTQVGQFSQQHGHLMTQQMNPLV
TSFAQQQVAQAGQQQGSQLGQAMQQHGQMMQHPSQQMPQAQVHQGQQMPQQLGQQTQQSQ
GSQMAQAQVHQFAHQQLHYTPYQQSIPPQGQQSSQQQTLHSAQGQPLANQQEYKATFHQR
EDDDFQQRNQVGFSPSRFQPAGASSVQNLPTGTNSVQMPQRAVHLGQPQQFGGPLGSMQN
PSSFGHLQQPGTDLVHHQHGSRFQSQMDPAMIHSQQSNAPPVGLRMGHENNFHARGGNDY
YFNSNNEGPTGPQQPKLAAIPVARSQQEMSMSGGPFQNATPGHASALNTMAGHSVHNLYS
HATGGPPFPNNSLVKSPYVGSTSVTSLTPVEVYRQQHEVTATGDNVPAPFMTFEDTGFPP
EILREIYSAGFASPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLMPAFILLRQSRNNS
QNGPTVLVLAPTRELATQIQDEVLKFGRASRVSCTCLYGGAPKGPQLKELDRGADIVVAT
PGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK
EVRKIAGDLLVNPVQVNIGSVDELEANKSITQYVEVVPQMEKQRRLEQILRSQERGSKVI
VFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLD
IKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAADLIKVLEGANQQ
VPPEVRDIALRGGPGFGRDRSAMSRFDSGGPGNGGGGRWDSGGRGGMRDGGFGGRGGMRD
GGFGGRGGDMRDGNFGGRSGPRDGAVGGRGGGSDFFSGRGNRGRGFGGPGGGNVGWGRND
RGPQDRYNSMDGRGRGGCGRGRFDNRIDFPDRSRGRSYSRSPERVRTWDISRSRSRSRSR
SRSRRSRSWTRSRSRSRSWSRGRSRSRSHSRSRSRSRNRSRSPSYERYERPPRVSKFDVK
DPVPESVAPPKSGMSPMSPGTEVNASPDTKPVGELPVAEETELMHKQQLEETLAVTQ
NT seq 3414 nt   +upstreamnt  +downstreamnt
atggcaacagcagagccagctggtccacgatatgcgccagatgatcctacacttccaaat
ccttggaagggtttgattgatggtagcacgggtttgttatactactggaaccctgaaacc
aacattacccagtatgaaaagccagcttctttgcctccacctttgccacccggcccacct
cctgctactaccacaccaaagctggcggcaactcccgtccctcattcaatgccaccaaat
ggagtggtgtctcaggatggcccgccgataacgcaagctccacaacagcagggaacacaa
gtgggccaattttctcaacagcatggacatctaatgacacaacagatgaatccccttgtg
acatcatttgctcaacagcaggtggctcaagctggacaacaacagggttcacaattggga
caggccatgcaacagcatgggcaaatgatgcagcatccaagtcagcaaatgccccaggca
caagtgcatcaagggcagcaaatgcctcagcaactggggcagcaaacacaacagagtcaa
ggttcacaaatggctcaggcacaagtgcaccaatttgcacatcagcaactgcattatacg
ccttatcagcaaagcattcctccccaagggcagcaaagttcacagcagcagactctgcat
agcgcacaagggcaaccactggcaaatcaacaagaatataaagccacattccaccagagg
gaagatgatgattttcaacaaagaaatcaagttggtttttctccatcccggtttcaacca
gcaggtgcctcatctgtgcagaatcttcctactgggaccaattccgtacaaatgccacag
agggctgtacatcttggtcaaccccaacaatttggtggccctttgggcagcatgcaaaat
ccttcgtcttttggtcacttgcagcaaccagggactgatttggttcaccatcaacatggc
tctaggttccaaagtcaaatggacccagcaatgatacatagtcagcagtctaatgcacct
cctgttggattaaggatgggtcatgaaaataatttccacgctagaggtgggaatgactat
tactttaacagtaataatgaagggccaacaggtcctcagcagcccaagcttgcagctatt
ccggtggcaagaagtcagcaggagatgagtatgagtggtggcccatttcaaaatgctaca
cctggtcatgccagtgcattgaataccatggcaggtcattccgtgcataacttgtacagt
catgcaacaggtggtccaccattcccaaataattctctggtgaagtctccttatgtcgga
tctacaagtgttactagtctcacacctgttgaagtttatcgtcagcaacatgaagttact
gcaacgggtgacaatgttcctgcaccgttcatgacatttgaagacaccggttttcctcct
gagatattgagagagatttattctgctgggttcgcatctcccacaccaatccaggcacaa
acatggccaattgctcttcaaagtagggatatagtggcaattgcaaaaactggttctgga
aaaactttgggctatttgatgcctgccttcattcttcttagacaatcccgtaataattct
cagaatggccctacagtcttggttttggccccaacacgggagcttgcaacacaaatacaa
gatgaggttttgaaatttgggcgagcttcaagggtatcctgcacgtgcttgtatggtgga
gctcctaaaggccctcagctgaaagaattagatcgtggagcagatatagttgtcgcaacg
cccggtcgactgaacgacatactggaaatgaagaaaattgattttgggcaagtttctcta
cttgtacttgatgaggcagatcgaatgcttgacatgggttttgaacctcaaatccgtaaa
atcgtgaacgaaatacccccacgcagacaaactcttatgtacactgcaacatggcccaaa
gaagtaagaaaaatagcaggtgatcttcttgttaatcctgtccaggtgaatattggcagt
gttgatgagcttgaagccaacaagtctattacacagtatgttgaagttgtcccacaaatg
gagaagcagaggcgcttggagcagatccttagatcccaggaacggggttctaaggtcatt
gttttttgttccacaaagaggttgtgcgatcagcttgcacgtagtattggacgcaacttt
ggggctgctgcaattcatggggacaagtctcaaggtgagagagactgggttttaaatcag
tttcgaagtggaaagtctccaatattggttgccactgatgttgctgcccgtgggcttgac
atcaaagatataagggtggtggttaactatgatttccctactggggttgaagattatgtt
caccggattggaagaactgggagggctggggcaactggggtgtcgtacacctttttctct
gagcaagattggaaatatgcagctgatttgataaaagttctggagggagctaaccagcaa
gtgcccccggaggtgcgagatattgctctgcgtggtgggcctggttttggcagggatagg
agtgcgatgagccgttttgattctggtgggcctgggaatggaggtggaggccgttgggat
tctggcggccgtggtggcatgagggatggaggttttggtggtcgtggtggcatgagggat
gggggttttggtggccgtggtggtgacatgagggatggaaactttggaggccgcagtggc
cctagagatggtgcagttggtggccgcggtgggggaagtgatttcttttctgggcgtgga
aacaggggacggggatttggtggtcctggtggtggtaatgttggttggggtagaaatgac
cgtggcccacaagataggtacaacagtatggatgggcgtgggcgagggggatgtggacgg
ggacgatttgataatagaatcgattttcctgataggagcagaggcagaagctatagccgt
agccctgaaagagttcgaacatgggatattagccgaagcagaagcagaagccgaagccgc
agcaggagtcgtagaagccgaagctggaccaggagtcgtagtcgtagtcggagctggtca
cgtggccgtagtcgcagccgcagccacagccgtagccggagtcgtagtcgtaaccgtagt
cgaagccccagttatgagagatatgagaggccgccacgtgtttcgaaatttgatgtcaaa
gatcctgttcctgaatctgtggctccacctaaatcagggatgtctcctatgtccccaggc
acagaagtcaatgcatccccagacacgaagcctgtgggggagctgccagtggctgaggag
actgagctaatgcataaacagcagctggaggagacccttgccgtcactcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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