KEGG   Prunus avium (sweet cherry): 110761284
Entry
110761284         CDS       T05161                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pavi03009]
    110761284
Enzymes [BR:pavi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110761284
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  90S particles
   Helicases
    110761284
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C DEAD HA2_C HA2_N nSTAND3 ResIII ATPase AAA_22 Sigma54_activat NACHT AAA_19
Other DBs
NCBI-GeneID: 110761284
NCBI-ProteinID: XP_021819421
UniProt: A0A6P5T066
Position
Unknown
AA seq 1087 aa
MSKSLKRKRNRLEVESKDAKRRKALQFPKAGFNKNNGDCACSDQTEPGHQIEKTQSKHDL
DEIHEDKVKESPKVNSSSRASELSEFPAARPPIAPTIVHVSRPDEVEETRKDLPIVMMEQ
EIMEAINENSTVIIRGETGCGKTTQVPQFLFEAGYGSSHSNSARSGIIGVTQPRRVAAYA
TAERVAYELGLNLGKEVGFQVRHDKRMSKSSCSIKFMTDGILLQELKSDFLLKQYSVIIL
DEVHVRSSNTDILIGMLSRVIVQRQKEYENQQKAVLLGKNISREQQIFPLKLVLMSATLR
EDFIRKLFGEPPIIEVPTRQFSVKAYYENRTEEEGDYVEKACKKVLKIHKRLPHGGILVF
VTGKREVQRLCQKLQGASRELMKRSVESDADEVSDIDSVEDELEGYSYDSETESEREFFH
DDDRDSLCQDTPRLVDGNVTEVAGEDGSIVSPKAGFDSWARKSSLFCNSAGKKGSFPGAL
HVVPLYARLNAEAQLTEIEKVKEGERLVVVATNVAETSLTISGIKYVVDTGKEKVKDYNS
NGMETYKIQWISKASADQRKGRAGRTGPGHCYRLYSQAVYYNKFPDFSAPEISEVPFDGV
ALLLKSMNILKISNFPFPTPPEASAVDEAERLLTALEASDTNGRLTPLGHSMACYPLRPR
HSRMLLTIFQIMSKQKNRARANLVLAYAVAAVASLSCSNPFLRQFEDIHTTNHDNVCSDA
PLEHSNQEKLTKKKLKETLKVPRERFFNPSSDALSRAYALQCYEISKRPVEFCNDNALHP
KTMEEISKLRKQLLERVFEQSGFSGGEKEFSWIYGSMEDVERDWRVSYDKNPLSLYEEEL
LGQAICAGWADRVAKRIRGRSSSVSSDLGDRKVRAVRYQACMVKETVFLDPWSSVSNSAP
EFLVYNELIQTRSGPYMYGVTRIKSEWLVEHARALCTFSAPPTDTKPYYEPLTDQIFRYV
IPAFGSHLWELPPFGLPMNKFDQFRDRVKAFAYALLQGQVLPCLKVVRKCMAEPPGNVLK
PEAAGRRRVGNLLEKLMRNKIHNCAALRQVWKENRMELHPEFLAWFNKSFQTSSFEALWS
LMLREVL
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgagcaaatccctgaaaagaaagcgcaacaggttggaggttgaatccaaagatgcaaaa
cgcaggaaagctttacaattcccaaaagctggatttaacaagaataatggcgactgtgct
tgtagtgatcaaactgagcctggtcatcagatagaaaaaactcaatcaaagcatgatttg
gatgagattcatgaggacaaagtaaaagagagtccaaaagtaaattccagcagcagagca
agtgaattatcagaatttcctgcagcaaggcctccaattgcaccaactatagtccatgta
tcaaggcctgatgaagttgaagaaacaaggaaggatcttccaatagtaatgatggagcag
gagatcatggaggccattaatgaaaattccactgtgattatacgtggagagactggatgt
ggtaaaacaacccaagttcctcagtttctttttgaagcgggctatggttcaagccactct
aattctgcacgaagtggtattattggtgtaactcaaccccgccgtgtagcagcctatgcg
acggctgagcgagtggcgtatgagcttggactgaatttaggtaaagaggtcggctttcaa
gttaggcatgacaaaaggatgagtaaaagtagttgctccatcaaattcatgacagacgga
atattactacaagaactcaagagtgattttttgttgaagcaatactctgtcataattctt
gatgaagttcatgtgcggagctcgaacaccgacatacttatcggaatgctttcacgtgtt
attgtacagcgtcagaaagaatacgaaaaccagcaaaaggcggtgcttttgggaaaaaac
ataagtcgtgaacaacagattttccctttaaagcttgtgctgatgagtgccaccttgcga
gaagactttatcagaaaactgtttggtgagcccccgatcatagaagttcccactagacaa
ttttcagtaaaagcttactacgaaaacagaactgaggaagaaggggattatgttgagaaa
gcatgtaaaaaagtcttgaagattcacaagagactaccacatggaggcatacttgtgttt
gtcactgggaagcgagaagtacagcgcttgtgtcaaaagctacaaggagcttcaagggaa
cttatgaaaagatcagttgagagtgatgctgatgaagtttctgatattgattctgttgag
gatgagttggagggttattcatatgattcagaaacagaaagtgaacgagaattttttcac
gatgacgatagggattcattgtgccaagataccccaagattagttgatggaaatgtgaca
gaggttgcaggagaggatggtagcattgtatcacctaaagccggtttcgattcttgggct
agaaaatcttcattgttctgtaattcagctgggaaaaagggtagttttccaggcgcactg
catgttgtccctctttatgccaggctgaatgcagaagctcaacttacagaaatagaaaaa
gtgaaggagggagaacggcttgttgttgtagccacaaatgtggctgaaacctctttaact
ataagcgggataaagtatgttgttgatactgggaaagagaaagtgaaggactacaattca
aatggcatggaaacatataaaatacagtggattagcaaggcatcagctgatcagcgtaaa
ggaagagctggaagaacagggcctggccattgttaccgcctgtattctcaagcagtgtat
tataacaaattccctgatttttccgcacctgaaatatccgaagtcccctttgatggtgtt
gcccttcttctcaagtctatgaatattcttaagatatccaattttccatttccaactcct
ccagaggctagtgctgtggatgaagcagagcgtctcttgacggcccttgaagcaagtgac
acaaatggaagattaacacctttagggcattccatggcttgttatcccctgcgtcctcgc
cactctcggatgctccttacgatttttcaaatcatgagtaaacagaaaaatcgtgctcga
gctaatttggtgttagcatatgcagttgcagcagttgcatctttgagttgttcaaatcct
tttctcaggcagtttgaagatattcacactacaaaccatgacaatgtttgcagcgatgcg
cctttggagcattcaaatcaagagaagttgacaaagaagaaactaaaagaaactctaaaa
gtgcctcgtgaaaggtttttcaatcccagcagtgatgctctgtccagagcttatgctttg
cagtgctatgaaatatccaagaggccagtggaattctgcaatgacaatgctctgcacccg
aaaaccatggaggaaatatccaagctgagaaagcagctcctcgaacgtgtctttgaacaa
agtggcttttctggtggggagaaggaattttcatggatctatggtagcatggaagatgta
gaacgtgattggagggtttcctatgataagaaccctctttccttgtatgaggaagagctc
ttgggccaagccatctgtgctggttgggcagatagggttgctaagcgcattagaggaagg
agttcatcagtgtcatctgatttaggagatcgaaaagttcgtgctgttcgatatcaagcc
tgcatggttaaagagactgtgttcctcgacccttggtcatctgtttctaattcagcccct
gaatttctggtgtacaatgagctaatccagacaagatcaggaccgtacatgtatggcgtt
actcgtataaaatcagaatggcttgttgagcatgcccgggctttatgcactttctctgca
cccccaacagataccaaaccttactacgagcctctaactgatcaaatatttcgttatgtc
attccagccttcggttctcatttgtgggagcttccaccatttggtttgccaatgaataaa
tttgatcagtttcgagatcgagtgaaagcttttgcttatgctttgcttcaaggccaggtt
ttgccttgcttaaaagttgttcgtaagtgtatggcagaacctcctggtaatgttttaaag
ccggaggcagctggtcgacggagggttgggaatcttttagagaagctgatgagaaacaag
attcataactgcgctgcgttaagacaggtttggaaggagaatcgcatggagttgcatcca
gaattcctggcctggtttaataagagtttccaaactagcagctttgaagccctttggtca
ctcatgcttcgtgaagttctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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