KEGG   Pseudomonas avellanae: BKM03_25290
Entry
BKM03_25290       CDS       T05369                                 
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pavl  Pseudomonas avellanae
Pathway
pavl03030  DNA replication
pavl03430  Mismatch repair
pavl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKM03_25290
   03430 Mismatch repair
    BKM03_25290
   03440 Homologous recombination
    BKM03_25290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pavl03032]
    BKM03_25290
   03400 DNA repair and recombination proteins [BR:pavl03400]
    BKM03_25290
Enzymes [BR:pavl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BKM03_25290
DNA replication proteins [BR:pavl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BKM03_25290
DNA repair and recombination proteins [BR:pavl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BKM03_25290
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C DNA_pol3_gamma3 CCCAP Arabino_trans_C
Other DBs
NCBI-ProteinID: AVB22140
Position
5259807..5260844
AA seq 345 aa
MKLAPAQLAKHLQGTLAPVYVISGDDPLLCQEAADAVRAAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVDGAHTQFVQIWPVDIGQLPQWIRQRLSQAGLAATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEEGQITVETVQAAVADSARFDVFGLTDAVLNGEAAHALRMLEGLRGE
GVETPVILWALTRELRALANMSQQFSQGVPLDKVFSSARPPIWDKRKPLMSKALQRHSAK
RWSQLLMDAQRIDAQIKGQAAGSPWSSLSRLALLMAGQRLALPAE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaaactcgcccccgcccaactggctaaacacctgcaaggtacgctcgcgcctgtctat
gtgatcagtggcgacgacccgctactctgtcaggaggctgccgacgccgtccgcgccgcc
gcacgccagcagggcttcgatgaacgtcaggtgttcagcgcagacgccagcttcgactgg
ggcacattgctccaggccggtgccagcatgtcgctgttcgccgagcgccgtcttctggaa
ctgcgcctgccttccggtaaacccggtgacaagggcgctgcggcgctaatggaatactgc
gccagaccggccgaagacaccctgctgctgatcagcctgcccaagctggatggcagcgcg
cagaagaccaaatggggcaaggcactggttgacggtgcgcacacccagttcgtgcaaatc
tggccggtggacatcggccagttgccgcaatggattcgccaacgtctttctcaagcggga
cttgccgccacacaggatgctgtcgaattgatcgccgcacgggttgaaggcaacctgctg
gctgctgcgcaggaaatcgaaaagctaaagctgatggccgaagaaggccagatcaccgta
gaaaccgtacaggctgcggtggctgacagcgcgcgcttcgatgtattcggcctgaccgac
gcggtgctcaacggcgaggcggcacatgccctgcgcatgcttgagggcctgcgcggcgaa
ggggtcgagacgccggtgattctctgggcgttgactcgcgaactgcgtgcgttggccaac
atgtcccaacagttcagccagggtgtgccgctcgacaaggtgttcagctcggcccgccca
ccgatctgggacaagcgcaaaccgctgatgagcaaggccctgcaacgccactcggcaaaa
cgctggagccagttgctgatggacgcgcagcgcatcgacgcacaaatcaagggccaggcg
gcaggctcgccgtggagcagcctgagccgactggcgctgctgatggcggggcagaggctg
gcgctgccggcggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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