KEGG   Pseudomonas avellanae: BKM03_25760
Entry
BKM03_25760       CDS       T05369                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pavl  Pseudomonas avellanae
Pathway
pavl02025  Biofilm formation - Pseudomonas aeruginosa
pavl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM03_25760
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    BKM03_25760
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pavl02044]
    BKM03_25760
Secretion system [BR:pavl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM03_25760
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AVB22227
Position
5361509..5361997
AA seq 162 aa
MAFDAFIQIADIPGEALDEKYSKWIEITGYNFGVNQSTSATASSSGGASSGRTTMTNFTF
TKYLDSASCKLMEASCAGQHLKEVKLVLCRAGTDKLKYYEVVLEEVIIADYTQSASSGIP
IEIVQLNYGRIKTTYTLQKRVDGTAGGNVAGGWDRINNKKYS
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctttcgacgcttttattcagatcgcagacatcccgggcgaggcgctggacgagaag
tacagcaagtggatcgaaataaccggctataactttggcgtcaaccaaagcacctctgcc
accgccagttcctcgggcggcgcttcatccggtcgtaccaccatgaccaacttcacgttt
accaaatacctcgacagcgccagttgcaagctcatggaagccagctgcgcaggccagcac
ctcaaggaagtcaagctggtactctgccgcgcaggcaccgacaagctcaaatactacgaa
gtggtgcttgaagaagtcatcattgccgactacacacagagcgcgagttccggcatccct
atcgaaatcgtacagctcaattacggccgcatcaaaaccacctacaccctgcagaaacgt
gtcgatggcacagcgggcggtaacgtggccggcggttgggaccggatcaataataaaaag
tactcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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