KEGG   Pogonomyrmex barbatus (red harvester ant): 105425267
Entry
105425267         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4B
  KO
K10609  cullin 4
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03420  Nucleotide excision repair
pbar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105425267
  09124 Replication and repair
   03420 Nucleotide excision repair
    105425267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pbar04121]
    105425267
   03400 DNA repair and recombination proteins [BR:pbar03400]
    105425267
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbar04147]
    105425267
Ubiquitin system [BR:pbar04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     105425267
DNA repair and recombination proteins [BR:pbar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105425267
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105425267
Exosome [BR:pbar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105425267
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF2018
Other DBs
NCBI-GeneID: 105425267
NCBI-ProteinID: XP_011634260
UniProt: A0A6I9W6K4
Position
Unknown
AA seq 739 aa
MCLVCVIEVYAILRCKKRNKSSRVPPHRGPTAGRCLHMSRFGDIQVWCVKQVKKAAIAAV
TISSPSSTSSTVAATTTATTAAATVTAIVAAAVVADLTAVLNYENVAKRCKLAAVSITHP
DEIDVIRGNEIIMADIAAATAAVATAAANDTQRRANFSALPGNPNGVKISSLANAKPGSA
KKLVIKNFKNKPKLPENYQEQTWEKLQEAVVAIQTSKSIRYSLEELYQAVENMCNHKMAS
TLYTNLTILTESHVKANIEQFLAESMDRHIFLKKMNECWQSHCRQMIMIRSIFLYLDRTY
VLQNPSISSIWDMGLHLFRLHIVLNNLVQTRTVEGLLMLIEKERQGDTVDRTLLKSLLRM
LSDLQIYQEAFETKFLLATERLYAAEGLRLMNEHDVPEYLAHVDKRLQEENERLLHYLDT
STKWSLIHTVEKQLLSEHITSILQKGLSGLLDENRISDLSLLYNLYSRXKNGLVELCLNF
NCYIKKKGKTIVIDPEKDKTMVQELLDFKDKMDNIVNTCFHKNEKFANSLKEAFEAFINQ
RANKPAELIAKFVDCKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVFEAFYKKDLAKR
LLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINIAFKQFPFFIFQNEE
QKATEERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQLKFPVKPADLKKRIESLI
DRDYMERDKDNSNQYNYVA
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgtgtctcgtgtgtgtgatcgaagtgtatgctattctgcggtgcaagaaaaggaataag
agtagtcgtgttcctccgcaccgagggccgacggccgggcgatgcttgcatatgtctagg
ttcggtgatattcaggtttggtgtgtcaaacaggtgaagaaggcggctattgccgccgtt
accatttcctccccctcctcaacaagctccaccgtcgctgctactaccaccgctaccacc
gccgccgccaccgtcaccgccatcgtcgctgccgccgtcgtcgccgatcttacggcggtg
ttgaattacgagaacgtagccaagcgctgcaagctggctgccgtgagcataacgcatccg
gacgagatcgacgtgatcaggggaaacgaaatcatcatggcggacatagcggctgccacc
gccgccgtcgctaccgctgctgcgaatgacacgcagaggcgggccaatttttcggcattg
ccaggcaatccgaacggcgtcaaaatctcgagcctcgcgaacgcaaaacccggctccgcg
aaaaagctcgtcatcaagaatttcaaaaataaacctaagctaccagagaactatcaagaa
caaacatgggaaaaattacaggaggctgtggttgcgatacaaaccagcaaaagcatccga
tattctttagaggaactttatcaggcagttgaaaatatgtgtaatcataaaatggcatca
acactttatacaaatttgactattctgacagaatctcacgtaaaggctaatattgaacaa
tttctggccgaatctatggatagacatatatttctaaaaaagatgaatgaatgttggcaa
tcacattgcagacaaatgataatgatcaggagcatatttctctatctcgatagaacatat
gttctacaaaacccgagcatttcatcgatatgggatatgggactacatctattcagactt
catattgtattgaataatttagtgcaaacacgtacagttgaaggtcttctcatgctcata
gaaaaggaacgacaaggtgacactgtagatcgaacacttctcaaatcgctattaagaatg
ttgtcggatctacaaatttatcaagaagcttttgaaacaaagttcctactggctacagaa
agattatatgctgctgaaggtctgcgattgatgaatgaacacgatgttcctgaatatctg
gctcatgtggataaacgtttgcaagaggaaaacgagcgactgttacattatctcgataca
tcaactaaatggtcactcatacacactgtagaaaaacaattattgtctgaacatattact
agtattttacagaaaggcttaagtggattgttggatgaaaataggattagtgatttatca
ttactttacaacttatacagtcggnataaaaatggccttgtggagctttgtttgaatttt
aattgttatatcaaaaaaaaaggcaaaacgatagttatagatcccgaaaaggataaaacg
atggtacaggagttgttagatttcaaagataaaatggataatatagttaatacatgcttt
cataaaaatgaaaagtttgcaaatagtttaaaagaagctttcgaggcttttattaatcaa
agagcaaacaaaccagcagaattaatagctaaatttgtcgattgtaagttacgtgcgggt
aataaagaagcaacagaagaagaattagagagattattagataaaattatggtactcttt
cggtttattcatggaaaggatgtttttgaggcgttttataaaaaggatttggccaaacgt
ttgttagtgggaaaatcagcttctgtagatgctgaaaagtcaatgttatctaaattaaaa
caggaatgcggtggtggatttactagtaaattagaaggaatgtttaaagatatggaactt
agtaaagatatcaatattgcgtttaaacagtttccatttttcatttttcagaatgaagaa
caaaaagcaacagaagagagagtttatcaagatagacaataccagatagatgctgctatt
gtcagaattatgaaaatgcgaaaaactctgacccataatcttcttatcagtgagctgtac
aatcaattaaagtttcctgtaaagcctgcagatttaaagaaacggatcgagtctcttata
gacagagactacatggaacgagataaggataattcaaatcaatacaattatgttgcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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