KEGG   Pogonomyrmex barbatus (red harvester ant): 105433689
Entry
105433689         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34
  KO
K20101  ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbar03019]
    105433689
Enzymes [BR:pbar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105433689
Messenger RNA biogenesis [BR:pbar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     105433689
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind DEAD HA2_C ResIII AAA_19 AAA_22 nSTAND3 HA2_N ATPase T2SSE
Other DBs
NCBI-GeneID: 105433689
NCBI-ProteinID: XP_011647406
Position
Unknown
AA seq 1184 aa
MSSKSGIKRHSSSHDSRREDNDNRYYYREKYRDGWKDEKRSYSRSMRNDQDMLKSSDHAR
EPHSQNSFSENPYKDNNEDPYCFSKCKHELNKIFIVNPNLVHDIEDFWKFVEKYESVKKQ
LDDSDESVTTDSALNSIGLPGKYHKSHCLNMKLALSYEELFARIFETKQLTKSQLFKFRD
VIILYLDFKQKEKFVKLKKLRNTQTNLPVTQYKQKIIEMIKREKVIIVAGDTGCGKSTQV
PQYLYEAGFRKIACTQPRRIACISLAKRVAFETLSENLNKVGYQIRFEKQXNQETNITFI
TEGLLLRQVSDESMLSMYDVIVLDEVHERHLHGDFLLGIMKCIICQKPDLKLVLMSATIN
IELFNNYFAKENVKLIEVPGRLYPIQVFYRPVTVEDLRYKNDRFNPSPYVQIMQIIDQKY
SADEKGDLLIFLSGISEITAVVDAAKEYSIKKNNWIVLPLHSTLSIAEQDKVFDYAPDGV
RKCIVATNIAETSITIDGIRFVADSGKVKEMSYDPLCKMQRLKEFWISKASAEQRKGRAG
RTGPGICYRIYSEEEYKILERYSTPELQRVPLDSSLLQMIAMGLPDARKFPFIEPPPANS
IENAILSLKDHGALTDNEKITCIGKTLARLPVDITIGKMLIMGSIFHQMEPVLSLAAALS
IQTPFTNRAYKDSECETSRKRLESDHGDPIILNVFKEWLEVKQENSQEYRSSSNSSRKWC
RRRGLEEQRFYEMTKLRAQFKDLLQDCNILKSLPEPNSSMTSAERAIRHGELKLLKSLKR
TYKQNEPKRRKQLKVETFDIQLEGDENNEGLDIKDIEFRMRNDSSQVQNLLTASTACSYK
DLTMLKLILCSGLYPQFACADEFNYCKSTSEQLFHTKAKPYVALHPMSFFGNHPQILQIE
DADIISIPGFKNKTLVSSKHQILAYLSLLETTKPYLVNTLRMPAAQTLLLFAHEIHTNSM
FSIMVCDSWLMLEFPVSDSGQILLMRATKLRKKWDFLLNQQLQGSDSANDEGKDFNKIEQ
NLTQELIEYMHTTIPYTIKRLLPADLKMIYVGSGNNNTSVEPNPFETDFKSIPNVTKGGV
YVTDNITYNCVKETNWSEQLIAEMQETEWHCQNCNLRASLSSLEKLQHQNSCTIAIDTTS
IDKERENVTRKANSQAYDCSACSLTLYLTPIEILKHKKLHIKAS
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgtcatcgaagagcgggataaagcgtcattcgtctagtcacgacagtagacgcgaagat
aatgataacaggtattattatagagaaaagtatcgtgatggttggaaagacgaaaaacgc
agctattcgagatccatgcgaaacgatcaagatatgcttaaatcttccgatcacgcgaga
gagcctcactcgcaaaattcattttcggaaaatccttacaaagataacaatgaggatcca
tattgttttagcaaatgtaagcacgaattgaataagattttcatagtaaatccgaatctc
gtccatgatatcgaggatttttggaaatttgtcgaaaaatacgagtctgtcaagaagcaa
ttagacgacagtgatgaatctgtgacaacagattccgcattaaattccattggcctaccg
ggaaagtatcacaaatcccattgtctaaacatgaagcttgccctgtcctatgaagaattg
tttgctagaatcttcgagacaaaacaattaaccaagtcgcaactatttaagttcagggat
gtgataatcttgtatctagactttaagcaaaaggagaaatttgtcaaattaaaaaagctt
cgaaacacacagactaatctaccagttacacaatacaaacaaaagattattgagatgata
aaaagagagaaagtaatcattgttgcaggagatactggttgtggaaaatctactcaagtc
cctcaatacttatatgaggctggtttccgcaagattgcatgtacacaacctcgaagaata
gcatgtatctcattagcgaaaagagtcgcctttgaaacattgagtgaaaatcttaataag
gtcggatatcagatacgttttgaaaaacaanaaaaccaagagacaaatattacatttata
acagaaggtttattgttgcgtcaggtatcggatgagtcaatgttatctatgtacgatgta
atagtcttggatgaagtgcacgaacgtcatctgcatggggattttttattgggcattatg
aaatgtattatttgtcaaaaacctgatttgaaattagtgctaatgtcagccactattaat
atagagctctttaataattacttcgcaaaggaaaacgttaaactaatagaagttcctgga
agattatatcccattcaagtgttttatcgacctgtaactgttgaagacctcagatacaaa
aatgatcgatttaatccaagtccgtatgtgcaaataatgcaaataattgaccaaaaatac
tcagctgacgaaaagggtgatttattaatattcttgagtgggataagtgaaattactgca
gttgtggatgctgccaaggaatatagtataaagaaaaataattggatagttttacccctt
catagtaccctttctattgctgaacaagataaggtatttgactatgcacctgatggtgtt
agaaagtgcattgttgcaactaatattgcagaaacttctattaccatcgatggaattaga
tttgttgccgatagtggaaaagtgaaagaaatgagttatgatccattatgtaaaatgcaa
agattgaaagaattttggataagtaaagccagtgcagaacaaagaaaaggaagagcaggc
agaactggacctggaatctgttatagaatttattcagaggaagagtataaaatattggaa
aggtattcaacgccagaattacaacgtgtacctttagattcttcgctgttgcaaatgata
gcgatgggacttcccgatgcacgaaagtttccatttatagaacctccaccagccaatagc
atagaaaatgctatactgtctttaaaagatcatggcgcactcacggataatgagaaaatc
acgtgtattggtaaaacgttagcacgactgcccgttgatatcacaatagggaagatgtta
ataatgggatctatttttcatcaaatggaacctgtattgtcattagcggctgctctaagt
atacagacaccttttactaatagggcatataaagactccgaatgtgaaacatctaggaag
agattagaatctgatcatggtgatccaattatattgaatgtatttaaagaatggctggaa
gtaaaacaagaaaattctcaagaatatagaagcagtagtaatagcagcagaaagtggtgc
agacgaagaggtttggaggaacaacggttctatgaaatgacgaaattgagggctcaattt
aaagacttactccaagactgtaatatactcaagagtctcccagaaccaaattcttccatg
acgagtgcagaacgtgcaataaggcatggagaattaaaacttttaaaatctctcaaaaga
acctataaacaaaatgaaccgaaaaggcggaaacaattaaaagtcgaaacatttgatata
caattggaaggggacgagaataatgaagggctcgacatcaaagacatagaatttcgaatg
agaaatgattcgagtcaggtgcagaatcttttaacagcatctaccgcatgtagctacaaa
gacttaacaatgttaaaattgatattatgtagcggtttatatccacaatttgcttgcgcc
gacgagtttaattattgtaagtctacaagtgaacaattatttcacacaaaagcaaaaccg
tatgttgctttgcatccaatgagcttttttggaaatcatccacaaattctgcaaattgaa
gatgcagatataatatcaataccagggtttaagaacaagacacttgttagctctaaacat
cagatattagcgtatttatccctcttggaaactacaaaaccttatctggtgaatacttta
agaatgcctgctgcacaaactttgctattatttgcacatgaaatacacacgaatagcatg
ttttctataatggtatgcgattcgtggttgatgttagaatttcctgtctctgacagtggt
caaattttattgatgagagctactaaattaagaaagaagtgggattttctattaaatcag
caattacaaggatctgatagtgctaatgatgaaggaaaagactttaataaaattgaacaa
aatcttacccaagaactaattgagtatatgcatactacaataccatatactataaagcgt
cttttaccggctgatctgaaaatgatatatgttggtagtggcaataataacacaagcgta
gagcctaatcctttcgaaacagattttaagagtataccaaatgtaactaaaggtggagtt
tatgtaacagataatattacatataattgtgtaaaagaaactaattggagtgaacagtta
attgcagaaatgcaggaaaccgaatggcattgccaaaattgtaatcttcgagcaagtcta
tcaagtctcgaaaaacttcaacatcaaaattcttgtacaattgcaatcgatacgactagt
atcgataaagaaagagaaaatgttacgcgtaaagctaatagtcaagcatatgattgttcc
gcttgttcgctaacgttgtatcttacgcctattgaaatattaaagcataagaaattgcat
attaaagcaagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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