KEGG   Pogonomyrmex barbatus (red harvester ant): 105434110
Entry
105434110         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein DSP1-like
  KO
K10802  high mobility group protein B1
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03410  Base excision repair
pbar04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105434110
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105434110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pbar03036]
    105434110
   03400 DNA repair and recombination proteins [BR:pbar03400]
    105434110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbar04147]
    105434110
Chromosome and associated proteins [BR:pbar03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    105434110
DNA repair and recombination proteins [BR:pbar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105434110
   MMR (mismatch excision repair)
    Other MMR factors
     105434110
Exosome [BR:pbar04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   105434110
SSDB
Motif
Pfam: HMG_box_2 HMG_box FTCD_C HMG_box_5
Other DBs
NCBI-GeneID: 105434110
NCBI-ProteinID: XP_011648020
UniProt: A0A6I9WWZ9
Position
Unknown
AA seq 268 aa
MDAAAQNNLHQQLQGQQQQQQPQQQHLSPITTQTSTPPVMSPHPIQQIPQNNLQQNNAQS
LQRDNMPRGKDSKPRGRMTAYAFFVQTCRQEHKKXHPEEKIVFREFSKKCAMRWKTMSDI
EKKRFHEMAEKDKKRYDAEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDE
RGKVKMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMQND
GAPMVGGAPANQTMIKSDSEEEWKEDDE
NT seq 807 nt   +upstreamnt  +downstreamnt
atggacgccgccgcgcagaacaacctgcatcagcagttgcagggccaacagcaacaacag
cagccacaacagcaacatctctcgcccattaccacgcaaacgtccacgccccccgttatg
tctccgcacccgatacagcagataccgcaaaataatcttcaacaaaataacgctcagagt
ctgcagcgggacaatatgccgagaggaaaagattcgaagccaagaggacggatgacagcg
tatgcgttcttcgtccagacatgtcgtcaggagcacaaaaagnaacatcccgaggagaag
atcgtcttccgggagttctccaaaaaatgtgcaatgaggtggaagactatgtcggacatc
gagaagaaacgtttccacgaaatggcagagaaagataagaagagatacgacgcagagatg
cagaattacacgccgcctaagggagaaaataagggcagaggcaagaaacgcaaacatatt
aaggatcacaatgctcccaagagatcgctgtctgctttcttctggttctgcaatgacgaa
cgcggtaaggtcaaaatgctgaatcctgaatatggcgtaggcgatatagctaaggaatta
ggcaagaaatggtcggacgcagatcccgaaaccaaatccaaatacgaggctatggcagag
aaggacaaagctcgatacgaaagggaaatgaccgcgtacaaaaagaaaatgcaaaacgac
ggcgccccgatggtgggaggagcgccggcgaaccaaactatgataaaaagcgacagtgaa
gaggaatggaaggaagacgacgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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