KEGG   Thiopseudomonas alkaliphila: AKN87_09750
Entry
AKN87_09750       CDS       T04152                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb00260  Glycine, serine and threonine metabolism
pbb00460  Cyanoamino acid metabolism
pbb00630  Glyoxylate and dicarboxylate metabolism
pbb00670  One carbon pool by folate
pbb00680  Methane metabolism
pbb01100  Metabolic pathways
pbb01110  Biosynthesis of secondary metabolites
pbb01120  Microbial metabolism in diverse environments
pbb01200  Carbon metabolism
pbb01230  Biosynthesis of amino acids
pbb01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AKN87_09750 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    AKN87_09750 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AKN87_09750 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    AKN87_09750 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AKN87_09750 (glyA)
Enzymes [BR:pbb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     AKN87_09750 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 DegT_DnrJ_EryC1 OKR_DC_1
Other DBs
NCBI-ProteinID: AKX45339
Position
complement(2016098..2017351)
AA seq 417 aa
MFSRDLTIARFDAELFEAMEKEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVIEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLEAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGITDEGFIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFREIADKVGAYLFVDMAHVAGLVAAGIYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANPELEKKLNSAVFPGSQGGPLEHVIAGKAICFKEALQPEFKAYQQQVVKNAQTMAQV
FVERGFDVVSGGTENHLFLLSLIKQDITGKDADAALGRANITVNKNSVPNDPRSPFVTSG
LRIGTPAITTRGFKEAECRDLATWICDILADIENEQVIAEVREKVKAICAKLPVYGN
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgatttaactattgctcgttttgacgccgaactgttcgaggcgatggag
aaagaagcccaacgccaagaagagcacattgagcttattgcttcagaaaactacaccagc
ccagcagtgatggaagcgcaaggttctgtgctgaccaacaagtacgctgaaggttatcca
ggcaagcgctattacggcggttgtgaacacgttgatgtgatcgagcaattagccattgat
cgcgctaaagagctattcggcgccgactacgctaacgtacagccccatgcaggctcacaa
gctaactctgctgtttacctagcattattagaagcgggcgatactattttaggtatgagc
ttagcccacggtggccacttaacccacggtgcttcagtgagctcttcaggcaaactgtac
aatgcggtgcagtacggcatcaccgatgaaggtttcatcgactacgacgaagttgagcgc
ttagcggttgaacataagccaaaaatgatcgtagccggtttctcagcttattctcaggtg
ttagattttgcccgcttccgtgaaattgcggacaaagtaggtgcttacctgtttgtcgat
atggcgcacgttgctggtttagttgctgctggcatctaccccaacccagtaccctttgcg
gacgtggtaaccaccactacccacaaaaccttacgcggtccacgtggcggtttaatttta
gctaaagctaaccctgagcttgagaaaaaactaaactcagcggtattcccaggtagccaa
ggcggcccgttagagcacgtcattgctggtaaagctatctgctttaaagaagcattacag
cctgagtttaaagcctaccaacagcaggtagtaaagaacgcacaaaccatggctcaagtt
tttgttgagcgtggctttgatgtggtgtctggcggtactgaaaaccacctgttcttgtta
tccctgatcaagcaagacattaccggtaaagatgccgatgctgctctaggccgcgcgaac
atcaccgttaacaaaaactccgtgccaaatgacccacgttcacctttcgttacttctggt
ttacgtattggtaccccagcaataaccacccgtggcttcaaagaagctgagtgccgtgac
cttgcaacttggatctgcgatattttagctgatatcgaaaacgagcaagtgatcgctgaa
gtacgcgaaaaagtgaaagcaatctgcgccaaattaccggtatacggtaactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (68)   

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