KEGG   Paenibacillus beijingensis: VN24_07130
Entry
VN24_07130        CDS       T03802                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj00470  D-Amino acid metabolism
pbj00550  Peptidoglycan biosynthesis
pbj01100  Metabolic pathways
pbj01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VN24_07130 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VN24_07130 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    VN24_07130 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbj01011]
    VN24_07130 (ddl)
Enzymes [BR:pbj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     VN24_07130 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:pbj01011]
 Precursor biosynthesis
  Amino acid ligase
   VN24_07130 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 GARS_A ATP-grasp_3
Other DBs
NCBI-ProteinID: AJY74391
UniProt: A0A0D5NGK2
Position
complement(1577111..1578250)
AA seq 379 aa
MGEKIRIGLIYGGKSGEHEVSLSTALAVMGAFDYDKYEIKPFYITKQGQWRAGQVLLAPP
RQVQELRLEDAQAAHDSALAPVFERLTGITPAEGGTDVTAAASEDDKPIEVMFPLLHGTY
GEDGTVQGLLEMAGIPYVGAGVLASAVGMDKVIMKKVFAQEGLPQCVFRYFNRTQWEKDH
TFFVMEAEVALGYPCFVKPANLGSSVGISKARNREELIQAVELAFRYDRKVIVEEFVDAR
EIEVSVLGNDEPKASLPGEIITSGDFYDYNAKYTDGKSVMQIPADLPAETAAAVREMAVR
AFLAIDGAGLSRVDFFLRREDGRLLINEVNTMPGFTPYSMYPLMWKESGMPYRKLLDNLI
ELSLARHAEKQRIEYGSGT
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgggggagaaaatacgcatcgggttgatctacggggggaaatcgggcgagcatgaagtt
tcgctctccaccgcgctggcggtaatgggcgctttcgattacgacaaatacgagatcaag
cctttctatattacaaaacaggggcagtggcgcgcggggcaggtgctgctggcgccgccc
cgccaagttcaggagcttcggctggaggatgcacaggccgcgcatgacagcgcccttgcg
ccggtgttcgagcgcctgacgggcataaccccggccgaaggcggcacggatgtaacggct
gcggcttcggaagatgacaagccgatcgaagtgatgttcccgctgctgcacggcacatac
ggcgaggacggcacggtgcaagggctgctggaaatggccggcattccttatgtcggggca
ggcgtgctcgcttcggcggttggtatggacaaggtcatcatgaaaaaagtttttgcccag
gagggtctgccccaatgtgtattccggtactttaatcggacacaatgggaaaaggaccat
acgttcttcgttatggaagcggaagtggcgctcgggtacccgtgctttgtgaaaccggcc
aacctcggttcgagcgtaggcatctccaaagcccgcaaccgcgaggagctgatccaggcg
gtggagctggcgttccgctacgaccgcaaagtgattgtggaggaattcgtcgatgcgcgc
gaaattgaagtgagcgtgctcggcaacgacgagccgaaagcttccctgcccggggaaatc
atcacgtccggagacttctacgattacaacgccaagtatacggacggcaaatcggtcatg
cagattccggccgatctgccggcggaaacggcagcggcggtgcgcgagatggcggtgcgc
gcatttctggcgatcgacggcgcgggcctgtcgcgcgtcgactttttcctgcgccgcgaa
gacggcaggctgctcattaacgaagtgaacacgatgccgggcttcacgccttacagcatg
tacccgctcatgtggaaggaaagcggaatgccgtaccgcaagctgctcgacaacctgatc
gagctgtcgctcgcccgtcacgccgagaagcagcgcatcgagtacggaagcggaacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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