KEGG   Paenibacillus beijingensis: VN24_24415
Entry
VN24_24415        CDS       T03802                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VN24_24415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_24415
Enzymes [BR:pbj01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VN24_24415
DNA repair and recombination proteins [BR:pbj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VN24_24415
 Prokaryotic type
     VN24_24415
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S ZT_dimer RecR_HhH HHH_5 HHH_8 CBP_BcsN DUF2400
Other DBs
NCBI-ProteinID: AJY77114
UniProt: A0A0D5NPA1
Position
complement(5412466..5413155)
AA seq 229 aa
MNAKQKTRHILDVLADMFPDAHCELNHSNPFELTIAVLLSAQCTDETVNKVTASLFQKYK
KPEDYLNVPQEELEQDIRRIGLFRNKAANIQKLCRILLEKYDGEVPREHSMLTELPGVGR
KTANVVVSNAFGVPAIAVDTHVERVSKRLGLAKADDSVLEVEKKLMKLVPQEEWTLTHHR
LIFFGRYHCKAASPKCDICPLLDLCKEGQRRMKPAAARKTTSKKQKIAK
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaacgccaaacagaagacgcgtcacattctggatgtattggccgacatgtttccggac
gcgcactgcgaattgaatcacagcaatccgttcgagctgacgatcgcggtgctgctttcg
gcgcagtgtacggatgaaacggtcaacaaagtgacggcttcgctttttcagaaatacaag
aagcccgaagattatctgaatgtgccgcaggaagaactggaacaggatatccgccggatc
ggcttgttccgcaacaaggcggcgaacatacagaagctgtgccgtattttgctggagaag
tatgacggagaggtgccgcgggagcatagcatgttgaccgagctgcccggcgtcgggcgc
aagacggccaatgttgtcgtctccaatgcgttcggcgtccctgcaattgccgtcgatacg
catgtcgaacgcgtatccaagcggcttggcctggcgaaagcggacgactccgtccttgaa
gtggagaagaagctgatgaagctcgtgccgcaggaagagtggacgctcacgcatcaccgc
ctgatctttttcggccggtatcattgcaaggcggcgagcccgaaatgcgatatttgcccg
ctgctcgatttatgcaaggaaggccaaagacgaatgaaaccggcagctgcccgcaaaacg
acgagtaaaaaacaaaaaatagcgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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